List of restriction enzyme cutting sites: Ba–Bc

Legend of nucleobases
Code	Nucleotide represented
A	Adenine (A)
C	Cytosine (C)
G	Guanine (G)
T	Thymine (T)
N	A, C, G or T
M	A or C
R	A or G
W	A or T
Y	C or T
S	C or G
K	G or T
H	A, C or T
B	C, G or T
V	A, C or G
D	A, G or T

This article contains a list of the most studied restriction enzymes whose names start with Ba to Bc inclusive. It contains approximately 120 enzymes.

The following information is given:

Enzyme: Accepted name of the molecule, according to the internationally adopted nomenclature^[1]^[2], and bibliographical references. (Further reading: see the section "Nomenclature" in the article "Restriction enzyme".)
PDB code: Code used to identify the structure of a protein in the PDB database of protein structures. The 3D atomic structure of a protein provides highly valuable information to understand the intimate details of its mechanism of action^[3]^[4].
Source: Organism that naturally produces the enzyme.
Recognition sequence: Sequence of DNA recognized by the enzyme and to which it specifically binds.
Cut: Cutting site and DNA products of the cut. The recognition sequence and the cutting site usually match, but sometimes the cutting site can be dozens of nucleotides away from the recognition site^[5]^[6].
Isoschizomers and neoschizomers: An isoschizomer is an enzyme that recognizes the same sequence as another. A neoschizomer is a special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. A maximum number of 8-10 most common isoschizomers are indicated for every enzyme but there may be many more. Neoschizomers are shown in bold and green color font (e.g.: BamHI). When "None on date" is indicated, that means that there were no registered isoschizomers in the databases on that date with a clearly defined cutting site. Isoschizomers indicated in white font and grey background correspond to enzymes not listed in the current lists:

as in this not listed enzyme:

EcoR70I

Whole list navigation

Restriction enzymes

Ba - Bc

Enzyme PDB code Source Recognition sequence Cut Isoschizomers

Bac36I Bacillus alcalophilus 36 5' GGNCC
3' CCNGG 5' ---G GNCC--- 3'
3' ---CCNG G--- 5' AspS9I, AvcI, BavAII, Bce22I, Bsp1894I, Bsu54I, FmuI, NspIV

BaeI^[7] Bacillus sphaericus 5' ACN₄GTAYC
3' TGN₄CATYG 5' ---ACN₄GTAYCN₆NNNNNN --- 3'
3' ---TGN₄CATYGN₆N NNNNN--- 5' — None in May 2010 —

BalI^[8]^[9] Brevibacterium albidum 5' TGGCCA
3' ACCGGT 5' ---TGG CCA--- 3'
3' ---ACC GGT--- 5'

Bal228I Bacillus alcalophilus 228 5' GGNCC
3' CCNGG 5' ---G GNCC--- 3'
3' ---CCNG G--- 5' AspS9I, AvcI, BavAII, BshKI, Bsp1894I, Bsu54I, FmuI, NspIV

BamHI^[10]^[11]^[12]^[13]^[14]^[15]^[16]^[17]^[18]^[19]^[20]

^[21]^[22]^[23]^[24]^[25]^[26]^[27]^[28]^[29]^[30] 1BAM Bacillus amyloliquefaciens H 5' GGATCC
3' CCTAGG 5' ---G GATCC--- 3'
3' ---CCTAG G--- 5' AccEBI, AliI, ApaCI, AsiI, Bce751I, Bsp98I, Bsp4009I, BspAAIII, CelI, Nsp29132II, NspSAIV, SolI, SurI

BamNII Bacillus amyloliquefaciens N 5' GGWCC
3' CCWGG 5' ---G GWCC--- 3'
3' ---CCWG G--- 5' BcuAI, BsrAI, CauI, EagMI, FdiI, HgiCII, HgiJI, SinI

BanI^[31]^[32] Bacillus aneurinolyticus 5' GGYRCC
3' CCRYGG 5' ---G GYRCC--- 3'
3' ---CCRYG G--- 5' AccB1I, BbvBI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I, PfaAI

BanII^[12]^[31] Bacillus aneurinolyticus 5' GRGCYC
3' CYCGRG 5' ---GRGCY C--- 3'
3' ---C YCGRG--- 5'

BanIII^[31] Bacillus aneurinolyticus 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' AagI, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI

BanAI Bacillus anthracis 5' GGCC
3' CCGG 5' ---GG CC--- 3'
3' ---CC GG--- 5'

BasI Bacillus sp. 5' CCAN₅TGG
3' GGTN₅ACC 5' ---CCANNNN NTGG--- 3'
3' ---GGTN NNNNACC--- 5' AccB7I, AcpII, Asp10HII, Esp1396I, PflBI, PflMI, Van91I

BauI Bacillus aquaemaris RFL1 5' CACGAG
3' GTGCTC 5' ---C ACGAG--- 3'
3' ---GTGCT C--- 5'

BavI Bacillus alvei 5' CAGCTG
3' GTCGAC 5' ---CAG CTG--- 3'
3' ---GTC GAC--- 5'

BavAI Bacillus alvei A 5' CAGCTG
3' GTCGAC 5' ---CAG CTG--- 3'
3' ---GTC GAC--- 5'

BavAII Bacillus alvei A 5' GGNCC
3' CCNGG 5' ---G GNCC--- 3'
3' ---CCNG G--- 5' AspS9I, AvcI, BavBII, BshKI, Bsp1894I, Bsu54I, FmuI, NspIV

BavBI Bacillus alvei B 5' CAGCTG
3' GTCGAC 5' ---CAG CTG--- 3'
3' ---GTC GAC--- 5'

BavBII Bacillus alvei B 5' GGNCC
3' CCNGG 5' ---G GNCC--- 3'
3' ---CCNG G--- 5' AspS9I, Bac36I, BavAII, BshKI, BspBII, Bsu54I, FmuI, Pde12I

BavCI Bacillus alvei C 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' AagI, BanIII, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI

BbeI^[33] Bifidobacterium breve YIT4006 5' GGCGCC
3' CCGCGG 5' ---GGCGC C--- 3'
3' ---C CGCGG--- 5'

BbiII Bifidobacterium bifidum YIT4007 5' GRCGYC
3' CYGCRG 5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5' AcyI, AhaII, BbiII, HgiHII, Hin1I, Hsp92I, Msp17I, PamII

Bbi24I Bifidobacterium bifidum S-24 5' ACGCGT
3' TGCGCA 5' ---A CGCGT--- 3'
3' ---TGCGC A--- 5'

BbrI Bordetella bronchiseptica 4994 5' AAGCTT
3' TTCGAA 5' ---A AGCTT--- 3'
3' ---TTCGA A--- 5'

Bbr7I Bacillus brevis 7 5' GAAGAC
3' CTTCTG 5' ---GAAGACN₆N NNNNN--- 3'
3' ---CTTCTGN₆NNNNNN --- 5'

BbrPI^[34]^[35] Bacillus brevis 5' CACGTG
3' GTGCAC 5' ---CAC GTG--- 3'
3' ---GTG CAC--- 5' AcvI, BcoAI, Eco72I, PmaCI, PmlI, PspCI

BbsI^[36] Bacillus laterosporus 5' GAAGAC
3' CTTCTG 5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'

BbuI^[37] Bacillus circulans 5' GCATGC
3' CGTACG 5' ---GCATG C--- 3'
3' ---C GTACG--- 5'

BbvI^[38]^[39] Bacillus brevis 5' GCAGC
3' CGTCG 5' ---GCAGCN₇N NNNN--- 3'
3' ---CGTCGN₇NNNNN --- 5' AlwXI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I, BstV1I

BbvII^[40] Bacillus brevis 80 5' GAAGAC
3' CTTCTG 5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'

Bbv12I^[41]

Bacillus brevis 12

5' GWGCWC
3' CWCGWG

5' ---GWGCW C--- 3'
3' ---C WCGWG--- 5'

Alw21I, AspHI, Bsh45I, BsiHKAI,

HgiAI,

HpyF46II,

MspV281I

Bbv16II Bacillus brevis 16 5' GAAGAC
3' CTTCTG 5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'

BbvAI Bacillus brevis A 5' GAAN₄TTC
3' CTTN₄AAG 5' ---GAANN NNTTC--- 3'
3' ---CTTNN NNAAG--- 5' Asp700I, MroXI, PdmI, XmnI

BbvAII Bacillus brevis A 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' BavCI, Bci29I, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I

BbvAIII Bacillus brevis A 5' TCCGGA
3' AGGCCT 5' ---T CCGGA--- 3'
3' ---AGGCC T--- 5' AccIII, Aor13HI, BlfI, BseAI, Bsp13I, BspEI, Bsu23I, Kpn2I

BbvBI Bacillus brevis B 5' GGYRCC
3' CCRYGG 5' ---G GYRCC--- 3'
3' ---CCRYG G--- 5' BanI, BshNI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I, PfaAI

BbvCI^[42] Bacillus brevis 5' CCTCAGC
3' GGAGTCG 5' ---CC TCAGC--- 3'
3' ---GGAGT CG--- 5' AbeI

Bca77I Bacillus caldolyticus 5' WCCGGW
3' WGGCCW 5' ---W CCGGW--- 3'
3' ---WGGCC W--- 5'

BccI Bacteroides caccae 5' CCATC
3' GGTAG 5' ---CCATCNNNN N--- 3'
3' ---GGTAGNNNNN --- 5'

Bce4I Bacillus cereus B4 5' GCN₇GC
3' CGN₇CG 5' ---GCNNNNN NNGC--- 3'
3' ---CGNN NNNNNCG--- 5'

Bce22I Bacillus cereus 22 5' GGNCC
3' CCNGG 5' ---G GNCC--- 3'
3' ---CCNG G--- 5' AspS9I, Bac36I, BavAII, BshKI, BspBII, CcuI, FmuI, Pde12I

Bce83I^[43] Bacillus cereus 83 5' CTTGAG
3' GAACTC 5' ---CTTGAGN₁₃NNN --- 3'
3' ---GAACTCN₁₃N NN--- 5'

Bce243I Bacillus cereus 5' GATC
3' CTAG 5' --- GATC--- 3'
3' ---CTAG --- 5' Bfi57I, Bsp143I, BspJI, BstMBI, CviAI, Kzo9I, NdeII, Sth368I

Bce751I Bacillus cereus 751 5' GGATCC
3' CCTAGG 5' ---G GATCC--- 3'
3' ---CCTAG G--- 5' BamHI, Bce751I, BnaI, Bsp98I, Bsp4009I, BstI, NspSAIV, Pfl8I

BceAI Bacillus cereus 1315 5' ACGGC
3' TGCCG 5' ---ACGGCN₁₁N NN--- 3'
3' ---TGCCGN₁₁NNN --- 5'

BceBI Bacillus cereus 1323 5' CGCG
3' GCGC 5' ---CG CG--- 3'
3' ---GC GC--- 5' AccII, Bsh1236I, BtkI, Csp68KVI, FalII, FauBII, FnuDII, SelI, ThaI

BceCI Bacillus cereus 1195 5' GCN₇GC
3' CGN₇CG 5' ---GCNNNNN NNGC--- 3'
3' ---CGNN NNNNNCG--- 5'

BcefI^[44] Bacillus cereus fluorescens 5' ACGGC
3' TGCCG 5' ---ACGGCN₁₀NN N--- 3'
3' ---TGCCGN₁₀NNN --- 5'

BcgI^[45]^[46] Bacillus coagulans 5' CGAN₆TGC
3' GCTN₆ACG 5' ---CGAN₆TGCN₉NNN --- 3'
3' ---GCTN₆ACGN₉N NN--- 5'

Bci29I Bacillus circulans 29 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' BavCI, BciBI, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I

BciBI Bacillus circulans B 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' BavCI, BcmI, Bli86I, BseCI, BspZEI, Bsu15I, ClaI, Rme21I

BciBII Bacillus circulans B 5' CCWGG
3' GGWCC 5' ---CC WGG--- 3'
3' ---GGW CC--- 5' AjnI, ApyI, BptI, Bst1I, BstOI, BstM6I, Bst2UI, EcoRII, MvaI

BciVI^[47] Bacillus circulans 5' GTATCC
3' CATAGG 5' ---GTATCCN₄NN --- 3'
3' ---CATAGGN₄N N--- 5' BfuI

BclI^[15]^[48]^[49]

Bacillus caldolyticus

5' TGATCA
3' ACTAGT

5' ---T GATCA--- 3'
3' ---ACTAG T--- 5'

AbaI, BsiQI, BspXII,
BstT7I, FbaI, Ksp22I,	ParI

BcmI Bacillus sp. 5' ATCGAT
3' TAGCTA 5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5' BsuTUI, Bsu15I, BavCI, Bli86I, BspZEI, Rme21I, BseCI, BdiI

BcnI^[50]^[51]^[52]

2ODH

Bacillus centrosporus RFL1

5' CCSGG
3' GGSCC

5' ---CC SGG--- 3'
3' ---GGS CC--- 5'

AhaI, AseII, AsuC2I,	BpuMI,	CauII,
Eco1831I, HgiS22I,Kpn49kII, NciI

BcoI^[53] Bacillus coagulans SM 1 5' CYCGRG
3' GRGCYC 5' ---C YCGRG--- 3'
3' ---GRGCY C--- 5' Ama87I, AquI, BsoBI, BstSI, Eco88I, NspSAI, OfoI, PunAI

Bco5I Bacillus coagulans 5 5' CTCTTC
3' GAGAAG 5' ---CTCTTCN NNN--- 3'
3' ---GAGAAGNNNN --- 5'

Bco27I Bacillus coagulans 27 5' CCGG
3' GGCC 5' ---C CGG--- 3'
3' ---GGC C--- 5'

Bco116I Bacillus coagulans 116 5' CTCTTC
3' GAGAAG 5' ---CTCTTCN NNN--- 3'
3' ---GAGAAGNNNN --- 5'

Bco118I Bacillus coagulans 118 5' RCCGGY
3' YGGCCR 5' ---R CCGGY--- 3'
3' ---YGGCC R--- 5'

BcoAI Bacillus coagulans AUCM B-732 5' CACGTG
3' GTGCAC 5' ---CAC GTG--- 3'
3' ---GTG CAC--- 5' AcvI, BbrPI, Eco72I, PmaCI, PmlI, PspCI

BcoKI Bacillus coagulans 5' CTCTTC
3' GAGAAG 5' ---CTCTTCN NNN--- 3'
3' ---GAGAAGNNNN --- 5'

BcuI Bacillus coagulans Vs 29-022 5' ACTAGT
3' TGATCA 5' ---A CTAGT--- 3'
3' ---TGATC A--- 5' AhII, AclNI, SpeI

BcuAI Bacillus cereus BKM B-814 5' GGWCC
3' CCWGG 5' ---G GWCC--- 3'
3' ---CCWG G--- 5' BamNxI, BsrAI, Csp68KI, EagMI, FssI, HgiCII, HgiJI, SinI

Notes

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^ Jeremy MB, John LT, Lubert S (2002). "3. Protein Structure and Function". Biochemistry. San Francisco: W. H. Freeman. ISBN 0-7167-4684-0.
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^ Protozanova E, Demidov VV, Nielsen PE, Frank-Kamenetskii MD (July 2003). "Pseudocomplementary PNAs as selective modifiers of protein activity on duplex DNA: the case of type IIs restriction enzymes". Nucleic Acids Res. 31 (14): 3929–35. doi:10.1093/nar/gkg450. PMC 165965. PMID 12853608.
^ Aubert E, Spurgeon S, Ray W, Davies J (October 1990). "Purification and characterization of an isoschizomer of SphI from Bacillus circulans". Nucleic Acids Res. 18 (20): 6152. doi:10.1093/nar/18.20.6152. PMC 332440. PMID 2146591.
^ Gingeras TR, MIlazzo JP, Roberts RJ (November 1978). "A computer assisted method for the determination of restriction enzyme recognifion sites". Nucleic Acids Res. 5 (11): 4105–27. doi:10.1093/nar/5.11.4105. PMC 342737. PMID 724510.
^ Hattman S, Keister T, Gottehrer A (October 1978). "Sequence specificity of DNA methylases from Bacillus amyloliquefaciens and Bacillus brevis". J Mol Biol. 124 (4): 701–11. doi:10.1016/0022-2836(78)90178-X. PMID 712853.
^ Matvienko NI, Pachkunov DM, Kramarov VM (1984). "The recognition sequence of site-specific endonuclease BbvII from Bacillus brevis 80". FEBS Lett. 177 (1): 23–36. Bibcode:1984FEBSL.177...23M. doi:10.1016/0014-5793(84)80973-4.
^ Repin VE, Rechkunova NI, Degtyarev SK, Hachaturyan AA, Afrikyan EK (1989). "Aerobic spore-forming bacteria as producers of restriction endonucleases". Biol J Armenia. 42: 969–72.
^ Heiter DF, Lunnen KD, Wilson GG (May 2005). "Site-specific DNA-nicking mutants of the heterodimeric restriction endonuclease R.BbvCI". J Mol Biol. 348 (3): 631–40. doi:10.1016/j.jmb.2005.02.034. PMID 15826660.
^ Matvienko NN; Kramarov VM; Ivanov LYu; Matvienko NI (April 1992). "Bce83I, a restriction endonuclease from Bacillus cereus 83 which recognizes novel nonpalindromic sequence 5'-CTTGAG-3' and is stimulated by S-adenosylmethionine". Nucleic Acids Res. 20 (7): 1803. doi:10.1093/nar/20.7.1803. PMC 312275. PMID 1315959.
^ Venetianer P, Orosz A (April 1988). "BcefI, a new type IIS restriction endonuclease". Nucleic Acids Res. 16 (7): 3053–60. doi:10.1093/nar/16.7.3053. PMC 336451. PMID 2835751.
^ Kong H, Roemer SE, Waite-Rees PA, Benner JS, Wilson GG, Nwankwo DO (January 1994). "Characterization of BcgI, a new kind of restriction-modification system". J Biol Chem. 269 (1): 683–90. doi:10.1016/S0021-9258(17)42403-3. PMID 8276869.
^ Kong H, Morgan RD, Maunus RE, Schildkraut I (February 1993). "A unique restriction endonuclease, BcgI, from Bacillus coagulans". Nucleic Acids Res. 21 (4): 987–91. doi:10.1093/nar/21.4.987. PMC 309233. PMID 8451198.
^ Roberts RJ, Macelis D (January 1997). "REBASE-restriction enzymes and methylases". Nucleic Acids Res. 25 (1): 248–62. doi:10.1093/nar/25.1.248. PMC 146408. PMID 9016548.
^ Rowland GC, Lim PP, Glass RE (July 1992). "'Stop-codon-specific' restriction endonucleases: their use in mapping and gene manipulation". Gene. 116 (1): 21–6. doi:10.1016/0378-1119(92)90624-X. PMID 1628840.
^ Bingham AH, Atkinson T, Sciaky D, Roberts RJ (October 1978). "A specific endonuclease from Bacillus caldolyticus". Nucleic Acids Res. 5 (10): 3457–67. doi:10.1093/nar/5.10.3457. PMC 342687. PMID 724493.
^ Janulaitis A, Klimasauskas S, Petrusyte M, Butkus V (September 1983). "Cytosine modification in DNA by BcnI methylase yields N4-methylcytosine". FEBS Lett. 161 (1): 131–4. Bibcode:1983FEBSL.161..131J. doi:10.1016/0014-5793(83)80745-5. PMID 6884523.
^ Janulaitis AA, Petrusite MA, Jaskelavicene BP, Krayev AS, Skryabin KG, Bayev AA (January 1982). "A new restriction endonuclease BcnI from Bacillus centrosporus RFL 1". FEBS Lett. 137 (2): 178–80. Bibcode:1982FEBSL.137..178J. doi:10.1016/0014-5793(82)80343-8. PMID 6277689.
^ Sokolowska M, Kaus-Drobek M, Czapinska H, Tamulaitis G, Szczepanowski RH, Urbanke C, Siksnys V, Bochtler M (June 2007). "Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA". J Mol Biol. 369 (3): 722–34. doi:10.1016/j.jmb.2007.03.018. PMID 17445830.
^ Leung SM, Kam KM, Chan KY, Shaw PC (1990). "Purification and characterization of restriction endonuclease BcoI from a soil isolate of Bacillus coagulans". FEMS Microbiol Lett. 66 (2): 153–6. doi:10.1111/j.1574-6968.1990.tb03988.x. PMID 1936944.

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[pmid1177312-16] Wilson GA, Young FE (September 1975). "Isolation of a sequence-specific endonuclease (BamI) from Bacillus amyloliquefaciens H". J Mol Biol. 97 (1): 123–5. doi:10.1016/S0022-2836(75)80028-3. PMID 1177312.

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[pmid6283522-20] George J, Chirikjian JG (April 1982). "Sequence-specific endonuclease BamHI: relaxation of sequence recognition". Proc Natl Acad Sci USA. 79 (8): 2432–6. Bibcode:1982PNAS...79.2432G. doi:10.1073/pnas.79.8.2432. PMC 346212. PMID 6283522.

[pmid6469968-21] Mukhopadhyay P, Roy KB (1984). "Sequence-specific BamHI methylase. Purification and characterization". The Journal of Biological Chemistry. 259 (16): 10357–62. doi:10.1016/S0021-9258(18)90972-5. PMID 6469968.

[pmid7724581-22] Robinson CR, Sligar SG (April 1995). "Heterogeneity in molecular recognition by restriction endonucleases: osmotic and hydrostatic pressure effects on BamHI, Pvu II, and EcoRV specificity". Proc Natl Acad Sci USA. 92 (8): 3444–8. Bibcode:1995PNAS...92.3444R. doi:10.1073/pnas.92.8.3444. PMC 42183. PMID 7724581.

[pmid9783752-23] Viadiu H, Aggarwal AK (October 1998). "The role of metals in catalysis by the restriction endonuclease BamHI". Nat Struct Biol. 5 (10): 910–6. doi:10.1038/2352. PMID 9783752. S2CID 25062657.

[pmid7624794-24] Newman M, Strzelecka T, Dorner LF, Schildkraut I, Aggarwal AK (August 1995). "Structure of Bam HI endonuclease bound to DNA: partial folding and unfolding on DNA binding". Science. 269 (5224): 656–63. Bibcode:1995Sci...269..656N. doi:10.1126/science.7624794. PMID 7624794.

[pmid8528138-25] Roy KB, Vrushank D (July 1995). "Bam HI cleaves the self complementary dodecamer d-CGCGGAGCCGCG, before the two G's and possibly binds in the DNA major groove". Biochem Mol Biol Int. 36 (4): 759–70. PMID 8528138.

[pmid8081758-26] Newman M, Strzelecka T, Dorner LF, Schildkraut I, Aggarwal AK (May 1994). "Structure of restriction endonuclease bamhi phased at 1.95 A resolution by MAD analysis". Structure. 2 (5): 439–52. doi:10.1016/S0969-2126(00)00045-9. PMID 8081758.

[pmid8145855-27] Newman M, Strzelecka T, Dorner LF, Schildkraut I, Aggarwal AK (April 1994). "Structure of restriction endonuclease BamHI and its relationship to EcoRI". Nature. 368 (6472): 660–4. Bibcode:1994Natur.368..660N. doi:10.1038/368660a0. PMID 8145855. S2CID 2999008.

[pmid7978240-28] Roy KB, Vrushank D, Jayaram B (July 1994). "Use of isotope-dilution phenomenon to advantage in the determination of kinetic constants Km and Kcat for BamHI restriction endonuclease: an empirical and iterative approach". Anal Biochem. 220 (1): 160–4. doi:10.1006/abio.1994.1313. PMID 7978240.

[pmid1901989-29] Brooks JE, Nathan PD, Landry D, Sznyter LA, Waite-Rees P, Ives CL, Moran LS, Slatko BE, Benner JS (February 1991). "Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts". Nucleic Acids Res. 19 (4): 841–50. doi:10.1093/nar/19.4.841. PMC 333720. PMID 1901989.

[pmid9862213-30] Mukhopadhyay P, Roy KB (October 1998). "Protein engineering of BamHI restriction endonuclease: replacement of Cys54 by Ala enhances catalytic activity". Protein Eng. 11 (10): 931–5. doi:10.1093/protein/11.10.931. PMID 9862213.

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[pmid3037499-32] Schildkraut I, Lynch J, Morgan R (July 1987). "The cleavage site for the restriction endonucleases BanI and HgiC I is 5' ...G decreases GPyPuCC ...3'". Schildkraut I, Lynch J, Morgan R. 15 (13): 5492. doi:10.1093/nar/15.13.5492. PMC 305987. PMID 3037499.

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[pmid12853608-36] Protozanova E, Demidov VV, Nielsen PE, Frank-Kamenetskii MD (July 2003). "Pseudocomplementary PNAs as selective modifiers of protein activity on duplex DNA: the case of type IIs restriction enzymes". Nucleic Acids Res. 31 (14): 3929–35. doi:10.1093/nar/gkg450. PMC 165965. PMID 12853608.

[pmid2146591-37] Aubert E, Spurgeon S, Ray W, Davies J (October 1990). "Purification and characterization of an isoschizomer of SphI from Bacillus circulans". Nucleic Acids Res. 18 (20): 6152. doi:10.1093/nar/18.20.6152. PMC 332440. PMID 2146591.

[pmid724510-38] Gingeras TR, MIlazzo JP, Roberts RJ (November 1978). "A computer assisted method for the determination of restriction enzyme recognifion sites". Nucleic Acids Res. 5 (11): 4105–27. doi:10.1093/nar/5.11.4105. PMC 342737. PMID 724510.

[pmid712853-39] Hattman S, Keister T, Gottehrer A (October 1978). "Sequence specificity of DNA methylases from Bacillus amyloliquefaciens and Bacillus brevis". J Mol Biol. 124 (4): 701–11. doi:10.1016/0022-2836(78)90178-X. PMID 712853.

[pmidBbvII-40] Matvienko NI, Pachkunov DM, Kramarov VM (1984). "The recognition sequence of site-specific endonuclease BbvII from Bacillus brevis 80". FEBS Lett. 177 (1): 23–36. Bibcode:1984FEBSL.177...23M. doi:10.1016/0014-5793(84)80973-4.

[pmidBbv12I-41] Repin VE, Rechkunova NI, Degtyarev SK, Hachaturyan AA, Afrikyan EK (1989). "Aerobic spore-forming bacteria as producers of restriction endonucleases". Biol J Armenia. 42: 969–72.

[pmid15826660-42] Heiter DF, Lunnen KD, Wilson GG (May 2005). "Site-specific DNA-nicking mutants of the heterodimeric restriction endonuclease R.BbvCI". J Mol Biol. 348 (3): 631–40. doi:10.1016/j.jmb.2005.02.034. PMID 15826660.

[pmid1315959-43] Matvienko NN; Kramarov VM; Ivanov LYu; Matvienko NI (April 1992). "Bce83I, a restriction endonuclease from Bacillus cereus 83 which recognizes novel nonpalindromic sequence 5'-CTTGAG-3' and is stimulated by S-adenosylmethionine". Nucleic Acids Res. 20 (7): 1803. doi:10.1093/nar/20.7.1803. PMC 312275. PMID 1315959.

[pmid_2835751-44] Venetianer P, Orosz A (April 1988). "BcefI, a new type IIS restriction endonuclease". Nucleic Acids Res. 16 (7): 3053–60. doi:10.1093/nar/16.7.3053. PMC 336451. PMID 2835751.

[pmid8276869-45] Kong H, Roemer SE, Waite-Rees PA, Benner JS, Wilson GG, Nwankwo DO (January 1994). "Characterization of BcgI, a new kind of restriction-modification system". J Biol Chem. 269 (1): 683–90. doi:10.1016/S0021-9258(17)42403-3. PMID 8276869.

[pmid8451198-46] Kong H, Morgan RD, Maunus RE, Schildkraut I (February 1993). "A unique restriction endonuclease, BcgI, from Bacillus coagulans". Nucleic Acids Res. 21 (4): 987–91. doi:10.1093/nar/21.4.987. PMC 309233. PMID 8451198.

[pmid_9016548-47] Roberts RJ, Macelis D (January 1997). "REBASE-restriction enzymes and methylases". Nucleic Acids Res. 25 (1): 248–62. doi:10.1093/nar/25.1.248. PMC 146408. PMID 9016548.

[pmid1628840-48] Rowland GC, Lim PP, Glass RE (July 1992). "'Stop-codon-specific' restriction endonucleases: their use in mapping and gene manipulation". Gene. 116 (1): 21–6. doi:10.1016/0378-1119(92)90624-X. PMID 1628840.

[pmid724493-49] Bingham AH, Atkinson T, Sciaky D, Roberts RJ (October 1978). "A specific endonuclease from Bacillus caldolyticus". Nucleic Acids Res. 5 (10): 3457–67. doi:10.1093/nar/5.10.3457. PMC 342687. PMID 724493.

[pmid6884523-50] Janulaitis A, Klimasauskas S, Petrusyte M, Butkus V (September 1983). "Cytosine modification in DNA by BcnI methylase yields N4-methylcytosine". FEBS Lett. 161 (1): 131–4. Bibcode:1983FEBSL.161..131J. doi:10.1016/0014-5793(83)80745-5. PMID 6884523.

[pmid6277689-51] Janulaitis AA, Petrusite MA, Jaskelavicene BP, Krayev AS, Skryabin KG, Bayev AA (January 1982). "A new restriction endonuclease BcnI from Bacillus centrosporus RFL 1". FEBS Lett. 137 (2): 178–80. Bibcode:1982FEBSL.137..178J. doi:10.1016/0014-5793(82)80343-8. PMID 6277689.

[pmid17445830-52] Sokolowska M, Kaus-Drobek M, Czapinska H, Tamulaitis G, Szczepanowski RH, Urbanke C, Siksnys V, Bochtler M (June 2007). "Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA". J Mol Biol. 369 (3): 722–34. doi:10.1016/j.jmb.2007.03.018. PMID 17445830.

[pmidBcoI-53] Leung SM, Kam KM, Chan KY, Shaw PC (1990). "Purification and characterization of restriction endonuclease BcoI from a soil isolate of Bacillus coagulans". FEMS Microbiol Lett. 66 (2): 153–6. doi:10.1111/j.1574-6968.1990.tb03988.x. PMID 1936944.

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v t e Restriction modification system: restriction enzyme
Basic Concept	Isoschizomer Neoschizomer Isocaudomer
Recognition sequence 4bp	TaqI Sau3A AluI* HaeIII* DpnII NlaIII HpaII
Recognition sequence 5bp	EcoRII FokI
Recognition sequence 6bp	AaaI BglII PovII* EcoRV* EcoRI BamHI HindIII XbaI XhoI SacI PstI NdeI
Recognition sequence 8bp	NotI
Lists	A Ba–Bc Bd–Bp Bsa–Bso Bsp–Bss Bst–Bv C-D E-F G-K L-N O-R S T-Z
* means cleavage produces blunt ends

List of restriction enzyme cutting sites: Ba–Bc

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