List of restriction enzyme cutting sites: A

Legend of nucleobases
Code	Nucleotide represented
A	Adenine (A)
C	Cytosine (C)
G	Guanine (G)
T	Thymine (T)
N	A, C, G or T
M	A or C
R	A or G
W	A or T
Y	C or T
S	C or G
K	G or T
H	A, C or T
B	C, G or T
V	A, C or G
D	A, G or T

This article contains a list of restriction enzymes whose names start with A and have a clearly defined cutting site.

The following information is given for each enzyme:

Name of Restriction Enzyme: Accepted name of the molecule, according to the internationally adopted nomenclature,^[1]^[2] and bibliographical references. Note: When alphabetizing, enzymes are first ordered alphabetically by the acronyms (everything before the roman numeral); then enzymes of a given acronym are ordered alphabetically by the roman numeral, treating the numeral as a number and not a string of letters. This helps keep the entries ordered hierarchically while also alphabetic.(Further reading: see the section "Nomenclature" in the article "Restriction enzyme".)
PDB code: Code used to identify the structure of a protein in the PDB database of protein structures. The 3D atomic structure of a protein provides highly valuable information to understand the intimate details of its mechanism of action.^[3]^[4]
REBASE Number: Number used to identify restriction enzymes in the REBASE restriction enzyme database. This database includes important information about the enzyme such as Recognition sequence, source, and Isoschizomers, as well as other data, such as the commercial suppliers of the enzyme.
Source: Organism that naturally produces the enzyme.
Recognition sequence: Sequence of DNA recognized by the enzyme and to which it specifically binds.
Cut: Displays the cut site and pattern and products of the cut. The recognition sequence and the cut site usually match, but sometimes the cut site can be dozens of nucleotides away from the recognition site.^[5]^[6]
Isoschizomers and neoschizomers: An isoschizomer is a restriction enzyme that recognizes the same sequence as another. A neoschizomer is a special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. A maximum number of 8–10 most common isoschizomers are indicated for every enzyme but there may be many more. Neoschizomers are shown in bold and green color font (e.g.: BamHI). When "None as of [date]" is indicated, that means that there were no registered isoschizomers in the databases on that date with a clearly defined cutting site. Isoschizomers indicated in white font and grey background correspond to enzymes not listed in the current lists, as in this not listed enzyme: Abc123I

Whole list navigation

Restriction enzymes

A

Enzyme	REBASE Number	Source	Recognition sequence	Cut	Isoschizomers
AaaI	1	Acetobacter aceti	`5' CGGCCG` `3' GCCGGC`	`5' ---C GGCCG--- 3'` `3' ---GCCGG C--- 5'`	BseX3I, BstZI, EagI, EclXI, Eco52I, SenPT16I, XmaIII
AagI	4	Achromobacter agile	`5' ATCGAT` `3' TAGCTA`	`5' ---AT CGAT--- 3'` `3' ---TAGC TA--- 5'`	BanIII, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, BsuTUI, ClaI
AanI	15358	Arthrobacter aurescens RFL2	`5' TTATAA` `3' AATATT`	`5' ---TTA TAA--- 3'` `3' ---AAT ATT--- 5'`	PsiI, Csp1BORF7380P
AarI^[7]	2892	Arthrobacter aurescens SS2-322	`5' CACCTGC` `3' GTGGACG`	`5' ---CACCTGCN₃N NNNN--- 3'` `3' ---GTGGACGN₃NNNNN --- 5'`	PaqCI
AasI	5465	Arthrobacter aurescens RFL3	`5' GACN₆GTC` `3' CTGN₆CAG`	`5' ---GACNNNN NNGTC--- 3'` `3' ---CTGNN NNNNCAG--- 5'`	DrdI, DseDI
AatI^[8]	6	Acetobacter aceti	`5' AGGCCT` `3' TCCGGA`	`5' ---AGG CCT--- 3'` `3' ---TCC GGA--- 5'`	AspMI, Eco147I, Eco1524I, PceI, Pme55I, SarI, Sru30DI, SteI
AatII^[8]^[9]^[10]^[11]	7	Acetobacter aceti	`5' GACGTC` `3' CTGCAG`	`5' ---GACGT C--- 3'` `3' ---C TGCAG--- 5'`	Ssp5230I, ZraI
AauI	3010	Arthrobacter aurescens	`5' TGTACA` `3' ACATGT`	`5' ---T GTACA--- 3'` `3' ---ACATG T--- 5'`	BsmRI, Bsp1407I, BsrGI, BstAUI, Ssp4800I, SspBI
AbaI	3029	Azospirillum brasilense UQ 1796	`5' TGATCA` `3' ACTAGT`	`5' ---T GATCA--- 3'` `3' ---ACTAG T--- 5'`	BclI, BsiQI, BspXII, BstT7I, FbaI, Ksp22I, ParI
AbeI	3097	Azotobacter beijerinckii Slo 54-028	`5' CCTCAGC` `3' GGAGTCG`	`5' ---CC TCAGC--- 3'` `3' ---GGAGT CG--- 5'`	BbvCI
AbrI	8	Azospirillum brasilense	`5' CTCGAG` `3' GAGCTC`	`5' ---C TCGAG--- 3'` `3' ---GAGCT C--- 5'`	BluI, BspAAI, BssHI, EscI, PaeR7I, SciI, Sfr274I, Sol10179I, StrI, TliI
AbsI	14594	Arthrobacter sp. 7M06	`5' CCTCGAGG` `3' GGAGCTCC`	`5' ---CC TCGAGG--- 3'` `3' ---GGAGCT CC--- 5'`	None as of 4 Apr. 2019
AccI^[12]^[13]^[14]^[15]	18	Acinetobacter calcoaceticus	`5' GTMKAC` `3' CAKMTG`	`5' ---GT MKAC--- 3'` `3' ---CAKM TG--- 5'`	FblI, XmiI
AccII^[12]^[16]	19	Acinetobacter calcoaceticus	`5' CGCG` `3' GCGC`	`5' ---CG CG--- 3'` `3' ---GC GC--- 5'`	Bsh1236I, Bsp50I, BstFNI, BstUI, MvnI, SelI, BceBI, BepI, Bpu95I
AccIII^[17]	20	Acinetobacter calcoaceticus	`5' TCCGGA` `3' AGGCCT`	`5' ---T CCGGA--- 3'` `3' ---AGGCC T--- 5'`	Aor13HI, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, PtaI
Acc16I	2638	Acinetobacter calcoaceticus 16	`5' TGCGCA` `3' ACGCGT`	`5' ---TGC GCA--- 3'` `3' ---ACG CGT--- 5'`	AosI, AviII, FdiII, FspI, MstI, NsbI, PamI, Pun14627I
Acc36I^[18]	4162	Acinetobacter calcoaceticus 36	`5' ACCTGC` `3' TGGACG`	`5' ---ACCTGCN₃N NNNN--- 3'` `3' ---TGGACGN₃NNNNN --- 5'`	BfuAI, BspMI, BveI
Acc65I^[19]	14	Acinetobacter calcoaceticus 65	`5' GGTACC` `3' CCATGG`	`5' ---G GTACC--- 3'` `3' ---CCATG G--- 5'`	AhaB8I, Asp718I, KpnI, SthI
Acc113I	2665	Acinetobacter calcoaceticus 113	`5' AGTACT` `3' TCATGA`	`5' ---AGT ACT--- 3'` `3' ---TCA TGA--- 5'`	AssI, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI
AccB1I	15	Acinetobacter calcoaceticus B1	`5' GGYRCC` `3' CCRYGG`	`5' ---G GYRCC--- 3'` `3' ---CCRYG G--- 5'`	BanI, BbvBI, BshNI, BspT107I, Eco64I, HgiCI, HgiHI, MspB4I
AccB2I	2666	Acinetobacter calcoaceticus B2	`5' RGCGCY` `3' YCGCGR`	`5' ---RGCGC Y--- 3'` `3' ---Y CGCGR--- 5'`	BfoI, Bme142I, Bsp143II, BstH2I, HaeII, LpnI
AccB7I^[20]	16	Acinetobacter calcoaceticus B7	`5' CCAN₅TGG` `3' GGTN₅ACC`	`5' ---CCANNNN NTGG--- 3'` `3' ---GGTN NNNNACC--- 5'`	AcpII, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I
AccBSI^[21]	2733	Acinetobacter calcoaceticus BS	`5' CCGCTC` `3' GGCGAG`	`5' ---CCG CTC--- 3'` `3' ---GGC GAG--- 5'`	BsrBI, BstD102I, Bst31NI, MbiI
AccEBI	17	Acinetobacter calcoaceticus EBF 65/65	`5' GGATCC` `3' CCTAGG`	`5' ---G GATCC--- 3'` `3' ---CCTAG G--- 5'`	AsiI, BamHI, Bce751I, Bsp98I, BspAAIII, CelI, OkrAI, Uba4009I
AceI	2571	Anabaena cedrorum	`5' GCWGC` `3' CGWCG`	`5' ---G CWGC--- 3'` `3' ---CGWC G--- 5'`	ApeKI, SuiI, Taq52I, TseI
AceII	2570	Anabaena cedrorum	`5' GCTAGC` `3' CGATCG`	`5' ---GCTAG C--- 3'` `3' ---C GATCG--- 5'`	AsuNHI, BmtI, BspOI, , LlaG2I, NheI, PstNHI
AceIII	2569	Anabaena cedrorum	`5' CAGCTC` `3' GTCGAG`	`5' ---CAGCTCN₅N NNNN--- 3'` `3' ---GTCGAGN₅NNNNN --- 5'`	— None as of May 2010 —
AciI^[11]^[22]	21	Arthrobacter citreus	`5' CCGC` `3' GGCG`	`5' ---C CGC--- 3'` `3' ---GGC G--- 5'`	SsiI
AclI^[23]	2181	Acinetobacter calcoaceticus M4	`5' AACGTT` `3' TTGCAA`	`5' ---AA CGTT--- 3'` `3' ---TTGC AA--- 5'`	Psp1406I
AclNI	2667	Acinetobacter calcoaceticus N20	`5' ACTAGT` `3' TGATCA`	`5' ---A CTAGT--- 3'` `3' ---TGATC A--- 5'`	AhlI, BcuI, SpeI
AclWI	2668	Acinetobacter calcoaceticus W2131	`5' GGATC` `3' CCTAG`	`5' ---GGATCN₃N N--- 3'` `3' ---CCTAGN₃NN --- 5'`	AlwI, BinI, BpuFI, BsrWI, BspPI, BstH9I, Bst31TI, EacI, Ral8I
AcoI	11822	Acinetobacter calcoaceticus	`5' YGGCCR` `3' RCCGGY`	`5' ---Y GGCCR--- 3'` `3' ---RCCGG Y--- 5'`	EaeI, Bfi89I, CfrI, EcoHK31I
AcpI	22	Acidiphilium cryptum 25H	`5' TTCGAA` `3' AAGCTT`	`5' ---TT CGAA--- 3'` `3' ---AAGC TT--- 5'`	Asp10HI, Bpu14I, Bsp119I, BstBI, Csp45I, FspII, MlaI, NspV, SspRFI
AcpII	23	Acidiphilium cryptum 25H	`5' CCAN₅TGG` `3' GGTN₅ACC`	`5' ---CCANNNN NTGG--- 3'` `3' ---GGTN NNNNACC--- 5'`	AccB7I, Asp10HII, BasI, Esp1396I, PflBI, PflMI, Van91I
AcrII	25	Anabaenopsis circularis	`5' GGTNACC` `3' CCANTGG`	`5' ---G GTNACC--- 3'` `3' ---CCANTG G--- 5'`	AspAI, Bse64I, BseT9I, BstEII, BstPI, Eco91I, EcoO65I, PspEI
AcsI^[24]	2184	Arthrobacter citreus 310	`5' RAATTY` `3' YTTAAR`	`5' ---R AATTY--- 3'` `3' ---YTTAA R--- 5'`	ApoI, CfaI, FsiI, XapI
AcuI	5534	Acinetobacter calcoaceticus	`5' CTGAAG` `3' GACTTC`	`5' ---CTGAAGN₁₃NNN --- 3'` `3' ---GACTTCN₁₃N NN--- 5'`	BspKT5I, Eco57I
AcvI	5359	Aeromonas caviae	`5' CACGTG` `3' GTGCAC`	`5' ---CAC GTG--- 3'` `3' ---GTG CAC--- 5'`	BbrPI, BcoAI, Eco72I, PmaCI, PmlI, PspCI
AcyI^[25]	31	Anabaena cylindrica	`5' GRCGYC` `3' CYGCRG`	`5' ---GR CGYC--- 3'` `3' ---CYGC RG--- 5'`	AhaII, AosII, BbiII, BsaHI, BstACI, Hin1I, HgiI, Hsp92I, Msp17I
AdeI	2991	Alcaligenes denitrificans Ss 3-028	`5' CACNNNGTG` `3' GTGNNNCAC`	`5' ---CACNNN GTG--- 3'` `3' ---GTG NNNCAC--- 5'`	BstIZ316I, DraIII
AeuI	33	Achromobacter eurydice	`5' CCWGG` `3' GGWCC`	`5' ---CC WGG--- 3'` `3' ---GGW CC--- 5'`	AglI, AjnI, BseBI, BstNI, BstOI, Bst2UI, EcoRII, SleI, SspAI
AfaI^[26]	37	Acidiphilium facilis 28H	`5' GTAC` `3' CATG`	`5' ---GT AC--- 3'` `3' ---CA TG--- 5'`	Csp6I, CviQI, CviRII, HpyBI, PabI, PlaAII, RsaI, RsaNI
Afa16RI	34	Acidiphilium sp. 16R	`5' CGATCG` `3' GCTAGC`	`5' ---CGAT CG--- 3'` `3' ---GC TAGC--- 5'`	Afa22MI, BspCI, EagBI, MvrI, NblI, Ple19I, PvuI, Psu161I, RshI, XorII
Afa22MI	35	Acidocella facilis	`5' CGATCG` `3' GCTAGC`	`5' ---CGAT CG--- 3'` `3' ---GC TAGC--- 5'`	Afa16RI, BspCI, EagBI, ErhB9I, NblI, Ple19I, Psu161I, PvuI, RshI
AfeI^[27]	2669	Alcaligenes faecalis T2774	`5' AGCGCT` `3' TCGCGA`	`5' ---AGC GCT--- 3'` `3' ---TCG CGA--- 5'`	AitI, Aor51H, Eco47III, FunI
AfiI	10489	Anoxybacillus flavithermus	`5' CCN₇GG` `3' GGN₇CC`	`5' ---CCNNNNN NNGG--- 3'` `3' ---GGNN NNNNNCC--- 5'`	Bsc4I, BseLI, BslI, BflI, Bsc107I, BsiYI, Bst22I
AflI^[28]		Anabaena flos-aquae	`5' GGWCC` `3' CCWGG`	`5' ---G GWCC--- 3'` `3' ---CCWG G--- 5'`	Asp745I, BamNI, BcuAI, CauI, Csp68KI, DsaIV, Eco47I, SinI
AflII^[28]^[29]^[30]	39	Anabaena flos-aquae	`5' CTTAAG` `3' GAATTC`	`5' ---C TTAAG--- 3'` `3' ---GAATT C--- 5'`	BfrI, BspTI, Bst98I, BstAFI, BstPZ740I, Esp4I, MspCI, Vha464I
AflIII^[28]^[10]	40	Anabaena flos-aquae	`5' ACRYGT` `3' TGYRCA`	`5' ---A CRYGT--- 3'` `3' ---TGYRC A--- 5'`	Asp90I
AgeI^[11]^[31]	42	Agrobacterium gelatinovorum	`5' ACCGGT` `3' TGGCCA`	`5' ---A CCGGT--- 3'` `3' ---TGGCC A--- 5'`	AsiAI, AsiGI, BshTI, CsiAI, CspAI, PinAI
AglI^[32]	6652	Arthrobacter globiformis	`5' CCWGG` `3' GGWCC`	`5' ---CC WGG--- 3'` `3' ---GGW CC--- 5'`	AeuI, Bse16I, Bse17I, Bse24I, BshGI, EcoRII, SleI, SniI, SslI
AgsI		Agrococcus sp. 25	`5' TTSAA` `3' AASTT`	`5' ---TTS AA--- 3'` `5' ---AA STT--- 3'`	None as of 4 May 2019
AhaI	45	Alteromonas haloplanktis B8	`5' CCSGG` `3' GGSCC`	`5' ---CC SGG--- 3'` `3' ---GGS CC--- 5'`	AseII, BcnI, BpuMI, CauII, Eco1831I, EcoHI, HgiS22I, NciI
AhaII		Aphanothece halophytica	`5' GRCGYC` `3' CYGCRG`	`5' ---GR CGYC--- 3'` `3' ---CYGC RG--- 5'`	AcyI, AstWI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiHII, PamII
AhaIII^[14]^[29]^[30]^[33]		Aphanothece halophytica	`5' TTTAAA` `3' AAATTT`	`5' ---TTT AAA--- 3'` `3' ---AAA TTT--- 5'`	DraI, PauAII, SruI
AhaB8I		Aphanothece halophytica B8	`5' GGTACC` `3' CCATGG`	`5' ---G GTACC--- 3'` `3' ---CCATG G--- 5'`	Acc65I, Asp718I, KpnI, SthI
AhdI^[34]^[35]		Aeromonas hydrophila	`5' GACN₅GTC` `3' CTGN₅CAG`	`5' ---GACNNN NNGTC--- 3'` `3' ---CTGNN NNNCAG--- 5'`	AspEI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI
AhlI	4838	Alteromonas haloplanktis SP	`5' ACTAGT` `3' TGATCA`	`5' ---A CTAGT--- 3'` `3' ---TGATC A--- 5'`	AclNI, BcuI, SpeI
AhyI	49	Aeromonas hydrophila	`5' CCCGGG` `3' GGGCCC`	`5' ---C CCGGG--- 3'` `3' ---GGGCC C--- 5'`	Cfr9I, CfrJ4I, EaeAI, EclRI, PaeBI, SmaI, TspMI, XmaI, XmaCI
AitI	54	Aquaspirillum itersonii	`5' AGCGCT` `3' TCGCGA`	`5' ---AGC GCT--- 3'` `3' ---TCG CGA--- 5'`	AfeI, Aor51H, Eco47III, FunI
AjiI	10919	Acinetobacter johnsonii RFL47	`5' CACGTC` `3' GTGCAG`	`5' ---CAC GTC--- 3'` `3' ---GTG CAG--- 5'`	BmgBI, BtrI
AjnI	7185	Acinetobacter johnsonii R2	`5' CCWGG` `3' GGWCC`	`5' --- CCWGG--- 3'` `3' ---GGWCC --- 5'`	AorI, ApaORI, ApyI, EcoRII, MvaI, Psp6I, PspGI, SleI, SspAI
AjoI	2604	Acinetobacter johnsonii 35	`5' CTGCAG` `3' GACGTC`	`5' ---CTGCA G--- 3'` `3' ---G ACGTC--- 5'`	ApiI, BloHII, BspMAI, CfrA4I, CfuII, PstI, SalPI, SflI, Srl5DI
AjuI	7740	Acinetobacter junii RFL46	`5' GAAN₇TTGG` `3'CTTN₇AACC`	`5' ---NNNNN NN₆GAAN₇TTGGN₅NNNNNN --- 3'` `3' --- NNNNNNN₆CTTN₇AACCN₅N NNNNN--- 5'`	None as of 28 Oct. 2020
AleI	5791	Aureobacterium liquefaciens	`5' CACN₄GTG` `3' GTGN₄CAC`	`5' ---CACNN NNGTG--- 3'` `3' ---GTGNN NNCAC--- 5'`	OliI
AlfI	6110	Acinetobacter lwoffii BH 32	`5' GCAN₆TGC` `3' CGTN₆ACG`	`5' ---GCAN₆TGCN₉NNN --- 3'` `3' ---CGTN₆ACGN₉N NN--- 5'`	None as of May 2010
AliI		Acetobacter liquefaciens	`5' GGATCC` `3' CCTAGG`	`5' ---G GATCC--- 3'` `3' ---CCTAG G--- 5'`	AccEBI, BamHI, Bce751I, Bsp98I, BspAAIII, Nsp29132II, Pfl8I
AliAJI	59	Acetobacter liquefaciens AJ 2881	`5' CTGCAG` `3' GACGTC`	`5' ---CTGCA G--- 3'` `3' ---G ACGTC--- 5'`	ApiI, Asp713I, BspMAI, CflI, CstI, MhaAI, PstI, SalPI, Sst12I, YenI
AloI^[36]^[37]	2812	Acinetobacter lwoffii Ks 4-8	`5' GAACN₆TCC` `3' CTTGN₆AGG`	`5' ---GAACN₆TCCN₆NNNNNN --- 3'` `3' ---CTTGN₆AGGN₆N NNNNN--- 5'`	None as of May 2010
AluI^[12]^[14]^[38]^[39]^[40]^[41]	61	Arthrobacter luteus	`5' AGCT` `3' TCGA`	`5' ---AG CT--- 3'` `3' ---TC GA--- 5'`	AluBI, MltI
AluBI	16189	Arthrobacter luteus B	`5' AGCT` `3' TCGA`	`5' ---AG CT--- 3'` `3' ---TC GA--- 5'`	AluI, MltI
AlwI	65	Acinetobacter lwoffii	`5' GGATC` `3' CCTAG`	`5' ---GGATCN₃N N--- 3'` `3' ---CCTAGN₃NN --- 5'`	AclWI, BinI, BspPI, BsrWI, BstH9I, BthII, Bth617I, EacI
Alw21I		Acinetobacter lwoffii RFL21	`5' GWGCWC` `3' CWCGWG`	`5' ---GWGCW C--- 3'` `3' ---C WCGWG--- 5'`	AspHI, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I
Alw26I^[42]	63	Acinetobacter lwoffii RFL26	`5' GTCTC` `3' CAGAG`	`5' ---GTCTCN NNNN--- 3'` `3' ---CAGAGNNNNN --- 5'`	BcoDI, BscQII, BsmAI, BsoMAI, BstMAI
Alw44I		Acinetobacter lwoffii RFL44	`5' GTGCAC` `3' CACGTG`	`5' ---G TGCAC--- 3'` `3' ---CACGT G--- 5'`	ApaLI, SnoI, VneI
AlwNI^[43]		Acinetobacter lwoffii N	`5' CAGNNNCTG` `3' GTCNNNGAC`	`5' ---CAGNNN CTG--- 3'` `3' ---GTC NNNGAC--- 5'`	CaiI
AlwXI	67	Acinetobacter lwoffii X	`5' GCAGC` `3' CGTCG`	`5' ---GCAGCN₇N NNNN--- 3'` `3' ---CGTCGN₇NNNNN --- 5'`	BbvI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I, BstV1I
Ama87I		Alteromonas macleodii 87	`5' CYCGRG` `3' GRGCYC`	`5' ---C YCGRG--- 3'` `3' ---GRGCY C--- 5'`	AquI, AvaI, BmeT110I, BsiHKCI, BsoBI, Eco88I, Nli3877I, NspSAI
AmaCSI	26714	Arthrospira maxima CS-328	`5' GCTCCA` `3' CGAGGT`	`5' ---GCTCCAN₈NNN --- 3'` `3' ---CGAGGTN₈N NN--- 5'`	None as of 4 May 2018
AocI	74	Anabaena sp.	`5' CCTNAGG` `3' GGANTCC`	`5' ---CC TNAGG--- 3'` `3' ---GGANT CC--- 5'`	AyI, Bse21I, Bsu36I, Eco81I, Lmu60I, OaNI, MstII, SauI, SshAI
AocII		Anabaena sp.	`5' GDGCHC` `3' CHCGDG`	`5' ---GDGCH C--- 3'` `3' ---C HCGDG--- 5'`	BmyI, BsoCI, Bsp1286I, BspLS2I, MhlI, NspII, SduI
AorI	77	Acetobacter aceti orleanensis	`5' CCWGG` `3' GGWCC`	`5' ---CC WGG--- 3'` `3' ---GGW CC--- 5'`	BseBI, BstNI, BstOI, Bst2UI, EcoRII, MvaI, Sth117I, Tai
Aor13HI^[44]		Acidiphilium organovorum 13H	`5' TCCGGA` `3' AGGCCT`	`5' ---T CCGGA--- 3'` `3' ---AGGCC T--- 5'`	AccIII, BbvAIII, BlfI, BseAI, BsiMI, BspEI, CauB3I, Kpn2I, MroI, PtaI
Aor51HI^[45]	76	Acidiphilium organovorum 51H	`5' AGCGCT` `3' TCGCGA`	`5' ---AGC GCT--- 3'` `3' ---TCG CGA--- 5'`	AfeI, AitI, Eco47III, FunI
AosI		Anabaena oscillarioides	`5' TGCGCA` `3' ACGCGT`	`5' ---TGC GCA--- 3'` `3' ---ACG CGT--- 5'`	Acc16I, AviII, FdiII, FspI, MstI, NsbI, PamI, Pun14627I
AosII		Anabaena oscillarioides	`5' GRCGYC` `3' CYGCRG`	`5' ---GR CGYC--- 3'` `3' ---CYGC RG--- 5'`	AcyI, AstWI, BbiII, BsaHI, BstACI, Hin1I, HgiI, HgiGI, Msp17I, PamII
ApaI^[11]^[30]^[46]		Acetobacter pasteurianus pasteurianus	`5' GGGCCC` `3' CCCGGG`	`5' ---GGGCC C--- 3'` `3' ---C CCGGG--- 5'`	Bsp120I, PpeI, PspOMI
ApaBI^[47]		Acetobacter pasteurianus B	`5' GCAN₅TGC` `3' CGTN₅ACG`	`5' ---GCANNNNN TGC--- 3'` `3' ---CGT NNNNNACG--- 5'`	BstAPI
ApaCI		Acetobacter pasteurianus C	`5' GGATCC` `3' CCTAGG`	`5' ---G GATCC--- 3'` `3' ---CCTAG G--- 5'`	AliI, BamHI, BnaI, Bsp4009I, BstI, NspSAIV, Pfl8I, SolI, SurI
ApaLI^[48]^[49]		Acetobacter pasteurianus	`5' GTGCAC` `3' CACGTG`	`5' ---G TGCAC--- 3'` `3' ---CACGT G--- 5'`	Alw44I, SnoI, VneI
ApaORI	86	Acetobacter pasteurianus	`5' CCWGG` `3' GGWCC`	`5' ---CC WGG--- 3'` `3' ---GGW CC--- 5'`	AjnI, BstNI, BstOI, Bst1I, Bst2I, Fsp1604I, MvaI, Psp6I, PspGI
ApeKI^[50]		Aeropyrum pernix K1	`5' GCWGC` `3' CGWCG`	`5' ---G CWGC--- 3'` `3' ---CGWC G--- 5'`	AceI, SuiI, Taq52I, TseI
ApiI	2315	Arthrobacter picolinophilus	`5' CTGCAG` `3' GACGTC`	`5' ---CTGCA G--- 3'` `3' ---G ACGTC--- 5'`	Asp713I, Bsp63I, CfrA4I, PaePI, Pfl21I, Psp23I, PstI, SflI, Sst12I
ApoI^[51]		Arthrobacter protophormiae	`5' RAATTY` `3' YTTAAR`	`5' ---R AATTY--- 3'` `3' ---YTTAA R--- 5'`	AcsI, CfaI, FsiI, XapI, EcoRI
AplI	25962	Arthrospira platensis NIES-39	`5' CTGCAG` `3' GACGTC`	`5' ---CTGCA G--- 3'` `3' ---G ACGTC--- 5'`	See this site for a complete list.
ApyI	93	Arthrobacter pyridinolis	`5' CCWGG` `3' GGWCC`	`5' ---CC WGG--- 3'` `3' ---GGW CC--- 5'`	BciBII, BptI, BseBI, BstNI, BstOI, Bst2UI, Bst38I, Bst100I, MvaI
ApyPI	14756	Arcanobacterium pyogenes	`5' ATCGAC` `3' TAGCTG`	`5' ---ATCGACN₁₇NNN --- 3'` `3' ---TAGCTGN₁₇N NN--- 5'`	None as of 4 August 2019
AquI		Agmenellum quadruplicatum PR-6	`5' CYCGRG` `3' GRGCYC`	`5' ---C YCGRG--- 3'` `3' ---GRGCY C--- 5'`	BcoI, BmeT110I, BsmAI, BsoMAI, BsoBI, BstSI, Eco27kI, OfoI
AquII	20238	Agmenellum quadruplicatum PR-6	`5' GCCGNAC` `3' CGGCNTG`	`5' ---GCCGNACN₁₇NNN --- 3'` `3' ---CGGCNTGN₁₇N NN--- 5'`	None as of 4 August 2019
AquIII	20239	Agmenellum quadruplicatum PR-6	`5' GAGGAG` `3' CTCCTC`	`5' ---GAGGAGN₁₇NNN --- 3'` `3' ---CTCCTCN₁₇N NN--- 5'`	BseRI
AquIV	20240	Agmenellum quadruplicatum PR-6	`5' GRGGAAG` `3' CYCCTTC`	`5' ---GRGGAAGN₁₆NNN --- 3'` `3' ---CYCCTTCN₁₆N NN--- 5'`	None as of 4/9/19
ArsI	19405	Arthrobacter sp. NTS	`5' GACN₆TTYG` `3' CTGN₆AARC`	`5' ---NNNNN NN₇GACN₆TTYGN₅NNNNNN --- 3'` `3' --- NNNNNNN₇CTGN₆AARCN₅N NNNNN--- 5'`	None as of Oct. 28 2020
AscI^[11]^[52]		Arthrobacter sp.	`5' GGCGCGCC` `3' CCGCGCGG`	`5' ---GG CGCGCC--- 3'` `3' ---CCGCGC GG--- 5'`	PalAI, SgsI
AseI^[53]	96	Aquaspirillum serpens	`5' ATTAAT` `3' TAATTA`	`5' ---AT TAAT--- 3'` `3' ---TAAT TA--- 5'`	AsnI, BpoAI, PshBI, Sru4DI, VspI
AseII^[53]	97	Aquaspirillum serpens	`5' CCSGG` `3' GGSCC`	`5' ---CC SGG--- 3'` `3' ---GGS CC--- 5'`	AhaI, AsuC2I, BcnI, CauII, EcoHI, HgiS22I, Kpn49kII, Mgl14481I, NciI
AsiI		Azotobacter sp.	`5' GGATCC` `3' CCTAGG`	`5' ---G GATCC--- 3'` `3' ---CCTAG G--- 5'`	ApaCI, BamHI, BnaI, Bsp4009I, BstI, OkrAI, Pfl8I, SurI, Uba4009I
AsiAI	2853	Arthrobacter sp. A7359	`5' ACCGGT` `3' TGGCCA`	`5' ---A CCGGT--- 3'` `3' ---TGGCC A--- 5'`	AgeI, AsiGI, BshTI, CsiAI, CspAI, PinAI
AsiGI	10828	Arthrobacter sp. G	`5' ACCGGT` `3' TGGCCA`	`5' ---A CCGGT--- 3'` `3' ---TGGCC A--- 5'`	AgeI, AsiAI, BshTI, CsiAI, CspAI, PinAI
AsiSI		Arthrobacter sp.	`5' GCGATCGC` `3' CGCTAGCG`	`5' ---GCGAT CGC--- 3'` `3' ---CGC TAGCG--- 5'`	RgaI, SfaAI, , SgfI
Asi256I	18472	Arthrobacter sp. Ck256	`5' GATC` `3' CTAG`	`5' ---G ATC--- 3'` `3' ---CTA G--- 5'`	See this site for a complete list.
Asi372I	15803	Arthrobacter sp. Mn372	`5' ATGCAT` `3' TACGTA`	`5' ---ATGCA T--- 3'` `3' ---T ACGTA--- 5'`	Ppu10I, EcoT22I, Mph1103I, NsiI, Zsp2I, BfrBI, Csp68KIII, PinBI, SepI, SspD5II
AsnI^[54]	98	Arthrobacter sp. N-CM	`5' ATTAAT` `3' TAATTA`	`5' ---AT TAAT--- 3'` `3' ---TAAT TA--- 5'`	AseI, BpoAI, PshBI, Sru4DI, VspI
AspI^[55]		Achromobacter sp. 699	`5' GACNNNGTC` `3' CTGNNNCAG`	`5' ---GACN NNGTC--- 3'` `3' ---CTGNN NCAG--- 5'`	AtsI, PflFI, PsyI, TelI, Tth111I
Asp10HI		Acidiphilium sp. 10H	`5' TTCGAA` `3' AAGCTT`	`5' ---TT CGAA--- 3'` `3' ---AAGC TT--- 5'`	AsuII, BspT104I, BstBI, CbiI, Csp68KII, PlaII, PpaAI, Ssp1I
Asp10HII	100	Acidiphilium sp. 10H	`5' CCAN₅TGG` `3' GGTN₅ACC`	`5' ---CCANNNN NTGG--- 3'` `3' ---GGTN NNNNACC--- 5'`	AccB7I, AcpII, BasI, Esp1396I, PflBI, PflMI, Van91I
Asp26HI	111	Acidiphilium sp. 26H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp27HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, PctI
Asp27HI	112	Acidiphilium sp. 27H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp35HI, Asp36HI, Asp40HI, BmaHI, BsaMI, BscCI, BsmI
Asp35HI	117	Acidiphilium sp. 35H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp36HI, Asp40HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I
Asp36HI	118	Acidiphilium sp. 36H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp40HI, Asp50HI, BmaHI, BscCI, BsmI, Mva1269I, PctI
Asp40HI	120	Acidiphilium sp. 40H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp27HI, Asp36HI, Asp50HI, BsaMI, BscCI, BsmI, Mva1269I
Asp50HI	122	Acidiphilium sp. 50H	`5' GAATGC` `3' CTTACG`	`5' ---GAATGCN --- 3'` `3' ---CTTAC GN--- 5'`	Asp26HI, Asp35HI, Asp36HI, BsaMI, BscCI, BsmI, Mva1269I
Asp700I^[56]		Achromobacter sp. 700	`5' GAAN₄TTC` `3' CTTN₄AAG`	`5' ---GAANN NNTTC--- 3'` `3' ---CTTNN NNAAG--- 5'`	BbvAI, MroXI, PdmI, XmnI
Asp713I	131	Achromobacter sp. 713	`5' CTGCAG` `3' GACGTC`	`5' ---CTGCA G--- 3'` `3' ---G ACGTC--- 5'`	AjoI, AliAJI, BloHII, CfrA4I, Ecl37kI, MhaAI, PstI, SflI, Srl5DI, YenI
Asp718I^[57]		Achromobacter sp. 718	`5' GGTACC` `3' CCATGG`	`5' ---G GTACC--- 3'` `3' ---CCATG G--- 5'`	Acc65I, AhaB8I, KpnI, SthI
Asp745I		Achromobacter sp. 745	`5' GGWCC` `3' CCWGG`	`5' ---G GWCC--- 3'` `3' ---CCWG G--- 5'`	Bme18I, BsrAI, CauI, Eco47I, ErpI, FdiI, SinI, VpaK11AI, VpaK11BI
AspAI		Alcaligenes sp.	`5' GGTNACC` `3' CCANTGG`	`5' ---G GTNACC--- 3'` `3' ---CCANTG G--- 5'`	AcrII, Bse64I, BseT10I, BstEII, BstPI, Eco91I, EcoO65I, PspEI
AspA2I	6959	Arthrobacter sp. A2	`5' CCTAGG` `3' GGATCC`	`5' ---C CTAGG--- 3'` `3' ---GGATC C--- 5'`	AvrBII, AvrII, BlnI, BspA2I, XmaJI
AspEI^[58]		Aureobacterium sp.	`5' GACN₅GTC` `3' CTGN₅CAG`	`5' ---GACNNN NNGTC--- 3'` `3' ---CTGNN NNNCAG--- 5'`	AhdI, BmeRI, BspOVI, DriI, Eam1105I, EclHKI, NruGI
AspHI^[59]		Achromobacter sp. H	`5' GWGCWC` `3' CWCGWG`	`5' ---GWGCW C--- 3'` `3' ---C WCGWG--- 5'`	Alw21I, Bbv12I, Bsh45I, BsiHKAI, Bsm6I, HgiAI, MspV281I
AspLEI		Arthrobacter sp. LE3860	`5' GCGC` `3' CGCG`	`5' ---GCG C--- 3'` `3' ---C GCG--- 5'`	BspLAI, BstHHI, CfoI, FnuDIII, HhaI, Hin6I, HinP1I, HsoI, HspAI, SciNI
AspMI	2977	Acinetobacter sp. M	`5' AGGCCT` `3' TCCGGA`	`5' ---AGG CCT--- 3'` `3' ---TCC GGA--- 5'`	AatI, Eco147I, GdiI, PceI, SarI, Sru30DI, SseBI, SteI, StuI
AspMDI		Alcaligenes sp. MD1	`5' GATC` `3' CTAG`	`5' --- GATC--- 3'` `3' ---CTAG --- 5'`	BfuCI, Bsp143I, BstMBI, DpnII, Kzo9I, MboI, NdeII, Sau3AI
AspNI		Anabaena sp. J3	`5' GGNNCC` `3' CCNNGG`	`5' ---GGN NCC--- 3'` `3' ---CCN NGG--- 5'`	BmiI, BscBI, BspLI, NlaIV, PspN4I
AspS9I		Arthrobacter sp. S9	`5' GGNCC` `3' CCNGG`	`5' ---G GNCC--- 3'` `3' ---CCNG G--- 5'`	AsuI, AvcI, Bac36I, Bal228I, FmuI, NspIV, PspPI, Sau96I
AssI	4930	Arthrobacter sp.	`5' AGTACT` `3' TCATGA`	`5' ---AGT ACT--- 3'` `3' ---TCA TGA--- 5'`	Acc113I, BmcAI, Bpa34I, DpaI, Eco255I, RflFII, ScaI, ZrmI
AstWI		Anabaena sp.	`5' GRCGYC` `3' CYGCRG`	`5' ---GR CGYC--- 3'` `3' ---CYGC RG--- 5'`	AcyI, AsuIII, BsaHI, BstACI, Hin1I, HgiI, HgiDI, HgiGI, Msp17I
AsuI^[60]		Anabaena subcylindrica	`5' GGNCC` `3' CCNGG`	`5' ---G GNCC--- 3'` `3' ---CCNG G--- 5'`	AspS9I, AvcI, CcuI, Cfr13I, FmuI, MaeK81II, Nsp7121I, PspPI, UnbI
AsuII^[61]		Anabaena subcylindrica	`5' TTCGAA` `3' AAGCTT`	`5' ---TT CGAA--- 3'` `3' ---AAGC TT--- 5'`	AcpI, Bpu14I, Bsp119I, BspT104I, Csp45I, FspII, LspI, NspV, SfuI
AsuIII		Anabaena subcylindrica	`5' GRCGYC` `3' CYGCRG`	`5' ---GR CGYC--- 3'` `3' ---CYGC RG--- 5'`	AcyI, AsuIII, BbiII, BsaHI, BstACI, Hin1I, HgiHII, Hsp92I, Msp17I
AsuC2I	2901	Actinobacillus suis C2	`5' CCSGG` `3' GGSCC`	`5' ---CC SGG--- 3'` `3' ---GGS CC--- 5'`	AhaI, AseII, BcnI, Eco1831I, EcoHI, Kpn49kII, Mgl14481I, NciI
AsuHPI^[62]	2811	Actinobacillus suis HP	`5' GGTGA` `3' CCACT`	`5' ---GGTGAN₆NN --- 3'` `3' ---CCACTN₆N N--- 5'`	HphI, SspD5I
AsuNHI^[62]		Actinobacillus suis NH	`5' GCTAGC` `3' CGATCG`	`5' ---G CTAGC--- 3'` `3' ---CGATC G--- 5'`	AceII, BmtI, BspOI, LlaG2I, NheI, PstNHI
AtsI		Aureobacterium testaceum 4842	`5' GACNNNGTC` `3' CTGNNNCAG`	`5' ---GACN NNGTC--- 3'` `3' ---CTGNN NCAG--- 5'`	AspI, PflFI, PsyI, TelI, Tth111I
AvaI^[14]^[63]^[64]		Anabaena variabilis	`5' CYCGRG` `3' GRGCYC`	`5' ---C YCGRG--- 3'` `3' ---GRGCY C--- 5'`	AquI, Ama87I, BsiHKCI, BsoBI, BspLU4I, Eco88I, NspIII, PlaAI
AvaII^[12]^[14]^[41]^[63]^[64]		Anabaena variabilis	`5' GGWCC` `3' CCWGG`	`5' ---G GWCC--- 3'` `3' ---CCWG G--- 5'`	Bme18I, Bme216I, BsrAI, Eco47I, Kzo49I, Psp03I, SmuEI, VpaK11AI
AvcI		Actinomyces violaceoniger cristalomycini	`5' GGNCC` `3' CCNGG`	`5' ---G GNCC--- 3'` `3' ---CCNG G--- 5'`	AspS9I, BshKI, BsiZI, Bsp1894I, BspBII, BspF4I, Bsu54I, Pde12I
AviII		Anabaena variabillis (halle)	`5' TGCGCA` `3' ACGCGT`	`5' ---TGC GCA--- 3'` `3' ---ACG CGT--- 5'`	Acc16I, AosI, FdiII, FspI, MstI, NsbI, PamI, Pun14627I
AvrII^[11]^[29]	173	Anabaena variabilis UW	`5' CCTAGG` `3' GGATCC`	`5' ---C CTAGG--- 3'` `3' ---GGATC C--- 5'`	AspA2I, AvrBII, BlnI, BspA2I, XmaJI
AvrBII	171	Arthrobacter variabilis	`5' CCTAGG` `3' GGATCC`	`5' ---C CTAGG--- 3'` `3' ---GGATC C--- 5'`	AspA2I, AvrII, BlnI, BspA2I, XmaJI
AxyI^[65]	174	Acetobacter xylinus	`5' CCTNAGG` `3' GGANTCC`	`5' ---CC TNAGG--- 3'` `3' ---GGANT CC--- 5'`	AocI, BliHKI, Bse21I, BspR7I, Bsu36I, CvnI, Eco81I, Lmu60I

§ An HF version of this enzyme is available

Notes

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^ Roberts RJ, Belfort M, Bestor T, Bhagwat AS, Bickle TA, Bitinaite J, Blumenthal RM, Degtyarev SK, Dryden DT, Dybvig K, Firman K, Gromova ES, Gumport RI, Halford SE, Hattman S, Heitman J, Hornby DP, Janulaitis A, Jeltsch A, Josephsen J, Kiss A, Klaenhammer TR, Kobayashi I, Kong H, Krüger DH, Lacks S, Marinus MG, Miyahara M, Morgan RD, Murray NE, Nagaraja V, Piekarowicz A, Pingoud A, Raleigh E, Rao DN, Reich N, Repin VE, Selker EU, Shaw PC, Stein DC, Stoddard BL, Szybalski W, Trautner TA, Van Etten JL, Vitor JM, Wilson GG, Xu SY (April 2003). "A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes". Nucleic Acids Res. 31 (7): 1805–12. doi:10.1093/nar/gkg274. PMC 152790. PMID 12654995.
^ Jeremy MB, John LT, Lubert S (2002). "3. Protein Structure and Function". Biochemistry. San Francisco: W. H. Freeman. ISBN 0-7167-4684-0.
^ Anfinsen C.B. (1973). "Principles that Govern the Folding of Protein Chains". Science. 181 (4096): 223–30. Bibcode:1973Sci...181..223A. doi:10.1126/science.181.4096.223. PMID 4124164.
^ Kessler C, Manta V (August 1990). "Specificity of restriction endonucleases and DNA modification methyltransferases a review (Edition 3)". Gene. 92 (1–2): 1–248. doi:10.1016/0378-1119(90)90486-B. PMID 2172084.
^ Pingoud A, Jeltsch A (September 2001). "Structure and function of type II restriction endonucleases". Nucleic Acids Res. 29 (18): 3705–27. doi:10.1093/nar/29.18.3705. PMC 55916. PMID 11557805.
^ Grigaite R, Maneliene Z, Janulaitis A (November 2002). "AarI, a restriction endonuclease from Arthrobacter aurescens SS2-322, which recognizes the novel non-palindromic sequence 5'-CACCTGC(N)4/8-3'". Nucleic Acids Res. 30 (21): 123e–123. doi:10.1093/nar/gnf122. PMC 135850. PMID 12409482.
^ ^a ^b Sugisaki H, Maekawa Y, Kanazawa S, Takanami M (October 1982). "New restriction endonucleases from Acetobacter aceti and Bacillus aneurinolyticus". Nucleic Acids Res. 10 (19): 5747–52. doi:10.1093/nar/10.19.5747. PMC 320926. PMID 6292849.
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^ ^a ^b Roberts RJ (January 1983). "Restriction and modification enzymes and their recognition sequences". Nucleic Acids Res. 11 (1): r135–69. PMC 325705. PMID 6306557.
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^ ^a ^b ^c ^d Nishigaki K, Kaneko Y, Wakuda H, Husimi Y, Tanaka T (August 1985). "Type II restriction endonucleases cleave single-stranded DNAs in general". Nucleic Acids Res. 13 (16): 5747–60. doi:10.1093/nar/13.16.5747. PMC 321909. PMID 2994012.
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^ Degtyarev SK, Abdurashitov MA, Kolyhalov AA, Rechkunova NI (July 1992). "AclI, a new restriction endonuclease from Acinetobacter calcoaceticus recognizing 5'-AA^CGTT-3'". Nucleic Acids Res. 20 (14): 3787. doi:10.1093/nar/20.14.3787. PMC 334039. PMID 1322531.
^ Degtyarev SK, Kolyhalov AA, Rechkunova NI, Abdurashitov MA (July 1992). "AcsI, a new restriction endonuclease from Arthrobacter citreus 310 recognizing 5'-Pu decreases AATTPy-3'". Nucleic Acids Res. 20 (14): 3789. doi:10.1093/nar/20.14.3789. PMC 334041. PMID 1322532.
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^ Macícková-Cahová H, Hocek M (December 2009). "Cleavage of adenine-modified functionalized DNA by type II restriction endonucleases". Nucleic Acids Res. 37 (22): 7612–22. doi:10.1093/nar/gkp845. PMC 2794189. PMID 19820117. S2CID 17925157.
^ ^a ^b ^c Whitehead PR, Brown NL (April 1985). "Three restriction endonucleases from Anabaena flos-aquae". J Gen Microbiol. 131 (4): 951–8. doi:10.1099/00221287-131-4-951. PMID 2985742.
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[pmid7756931-32] Sokolov NN (1995). "Search, isolation and study of restrictases". Vestn Ross Akad Med Nauk (in Russian) (2): 47–51. PMID 7756931.

[pmid6288466-33] Whitehead PR, Brown NL (July 1982). "AhaIII: A restriction endonuclease with a recognition sequence containing only A:T basepairs". FEBS Lett. 143 (2): 296–300. Bibcode:1982FEBSL.143..296W. doi:10.1016/0014-5793(82)80120-8. PMID 6288466.

[pmid12771207-34] Marks P, McGeehan J, Wilson G, Errington N, Kneale G (June 2003). "Purification and characterisation of a novel DNA methyltransferase, M.AhdI". Nucleic Acids Res. 31 (11): 2803–10. doi:10.1093/nar/gkg399. PMC 156732. PMID 12771207.

[pmid18203750-35] Bogdanova E, Djordjevic M, Papapanagiotou I, Heyduk T, Kneale G, Severinov K (March 2008). "Transcription regulation of the type II restriction-modification system AhdI". Nucleic Acids Res. 36 (5): 1429–42. doi:10.1093/nar/gkm1116. PMC 2275141. PMID 18203750. S2CID 5338430.

[pmid11718555-36] Cesnaviciene E, Petrusyte M, Kazlauskiene R, Maneliene Z, Timinskas A, Lubys A, Janulaitis A (November 2001). "Characterization of AloI, a restriction-modification system of a new type". J Mol Biol. 314 (2): 205–16. doi:10.1006/jmbi.2001.5049. PMID 11718555.

[pmid17553965-37] Jurenaite-Urbanaviciene S, Serksnaite J, Kriukiene E, Giedriene J, Venclovas C, Lubys A (June 2007). "Generation of DNA cleavage specificities of type II restriction endonucleases by reassortment of target recognition domains". Proc Natl Acad Sci USA. 104 (25): 10358–63. Bibcode:2007PNAS..10410358J. doi:10.1073/pnas.0610365104. PMC 1965518. PMID 17553965.

[pmid809717-38] Blakesley RW, Wells RD (October 1975). "'Single-stranded' DNA from phiX174 and M13 is cleaved by certain restriction endonucleases". Nature. 257 (5525): 421–2. Bibcode:1975Natur.257..421B. doi:10.1038/257421a0. PMID 809717. S2CID 24619091.

[pmid1271462-39] Roberts RJ, Myers PA, Morrison A, Murray K (March 1976). "A specific endonuclease from Arthrobacter luteus". J Mol Biol. 102 (1): 157–65. doi:10.1016/0022-2836(76)90079-6. PMID 1271462.

[pmid673857-40] Greene PJ, Heyneker HL, Bolivar F, Rodriguez RL, Betlach MC, Covarrubias AA, Backman K, Russel DJ, Tait R, Boyer HW (July 1978). "A general method for the purification of restriction enzymes". Nucleic Acids Res. 5 (7): 2373–80. doi:10.1093/nar/5.7.2373. PMC 342170. PMID 673857.

[pmid6280151-41] Huang LH, Farnet CM, Ehrlich KC, Ehrlich M (March 1982). "Digestion of highly modified bacteriophage DNA by restriction endonucleases". Nucleic Acids Res. 10 (5): 1579–91. doi:10.1093/nar/10.5.1579. PMC 320551. PMID 6280151.

[pmid1408816-42] Bitinaite J, Maneliene Z, Menkevicius S, Klimasauskas S, Butkus V, Janulaitis A (October 1992). "Alw26I, Eco31I and Esp3I—type IIs methyltransferases modifying cytosine and adenine in complementary strands of the target DNA". Nucleic Acids Res. 20 (19): 4981–5. doi:10.1093/nar/20.19.4981. PMC 334273. PMID 1408816.

[pmid2821501-43] Morgan RD, Dalton M, Stote R (September 1987). "A unique type II restriction endonuclease from Acinetobacter lwoffi N". Nucleic Acids Res. 15 (17): 7201. doi:10.1093/nar/15.17.7201. PMC 306225. PMID 2821501.

[pmid7764267-44] Inagaki K, Hikita T, Yanagidani S, Nomura Y, Kishimoto N, Tano T, Tanaka H (October 1993). "Restriction endonuclease Aor13HI from Acidiphilium organovorum 13H, a new isoschizomer of BspMII: Purification and characterization". Biosci Biotechnol Biochem. 57 (10): 1716–21. doi:10.1271/bbb.57.1716. PMID 7764267.

[pmid1741262-45] Sagawa H, Takagi M, Nomura Y, Inagaki K, Tano T, Kishimato N, Kotani H, Nakajima K (January 1992). "Isolation and identification of restriction endonuclease Aor51HI from Acidiphilium organovorum 51H". Nucleic Acids Res. 20 (2): 365. doi:10.1093/nar/20.2.365. PMC 310379. PMID 1741262.

[pmid6306590-46] Seurinck J, Van, de Voorde A, Van Montagu M (July 1983). "A new restriction endonuclease from Acetobacter pasteurianus". Nucleic Acids Res. 11 (13): 4409–15. doi:10.1093/nar/11.13.4409. PMC 326055. PMID 6306590.

[pmid8457597-47] Grones J, Turna J (March 1993). "Some properties of restriction endonuclease ApaBI from Acetobacter pasteurianus". Biochim Biophys Acta. 1162 (3): 323–5. doi:10.1016/0167-4838(93)90297-5. PMID 8457597.

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v t e Restriction modification system: restriction enzyme
Basic Concept	Isoschizomer Neoschizomer Isocaudomer
Recognition sequence 4bp	TaqI Sau3A AluI* HaeIII* DpnII NlaIII HpaII
Recognition sequence 5bp	EcoRII FokI
Recognition sequence 6bp	AaaI BglII PovII* EcoRV* EcoRI BamHI HindIII XbaI XhoI SacI PstI NdeI
Recognition sequence 8bp	NotI
Lists	A Ba–Bc Bd–Bp Bsa–Bso Bsp–Bss Bst–Bv C-D E-F G-K L-N O-R S T-Z
* means cleavage produces blunt ends

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