In biology, a colony is composed of two or more conspecific individuals living in close association with, or connected to, one another. This association is usually for mutual benefit such as stronger defense or the ability to attack bigger prey.

Colonies can form in various shapes and ways depending on the organism involved. For instance, the bacterial colony is a cluster of identical cells (clones). These colonies often form and grow on the surface of (or within) a solid medium, usually derived from a single parent cell.

Colonies, in the context of development, may be composed of two or more unitary (or solitary) organisms or be modular organisms. Unitary organisms have determinate development (set life stages) from zygote to adult form and individuals or groups of individuals (colonies) are visually distinct. Modular organisms have indeterminate growth forms (life stages not set) through repeated iteration of genetically identical modules (or individuals), and it can be difficult to distinguish between the colony as a whole and the modules within. In the latter case, modules may have specific functions within the colony.

In contrast, solitary organisms - such as jaguars - do not associate with colonies; they are ones in which all individuals live independently and have all of the functions needed to survive and reproduce.

Some organisms are primarily independent and form facultative colonies in reply to environmental conditions while others must live in a colony to survive (obligate). For example, some carpenter bees will form colonies when a dominant hierarchy is formed between two or more nest foundresses (facultative colony), while corals are animals that are physically connected by living tissue (the coenosarc) that contains a shared gastrovascular cavity.

Unicellular and multicellular unitary organisms may aggregate to form colonies. For example,

Modular organisms are those in which a genet (or genetic individual formed from a sexually-produced zygote) asexually reproduces to form genetically identical clones called ramets.

A clonal colony is when the ramets of a genet live in close proximity or are physically connected. Ramets may have all of the functions needed to survive on their own or be interdependent on other ramets. For example, some sea anemones go through the process of pedal laceration in which a genetically identical individual is asexually produced from tissue broken off from the anemone's pedal disc. In plants, clonal colonies are created through the propagation of genetically identical individuals by stolons or rhizomes.