Neural coding

Neural coding (or neural representation) refers to the relationship between a stimulus and its respective neuronal responses, and the signalling relationships among networks of neurons in an ensemble. Action potentials, which act as the primary carrier of information in biological neural networks, are generally uniform regardless of the type of stimulus or the specific type of neuron. The simplicity of action potentials as a methodology of encoding information factored with the indiscriminate process of summation is seen as discontiguous with the specification capacity that neurons demonstrate at the presynaptic terminal, as well as the broad ability for complex neuronal processing and regional specialisation for which the brain-wide integration of such is seen as fundamental to complex derivations; such as intelligence, consciousness, complex social interaction, reasoning and motivation. As such, theoretical frameworks that describe encoding mechanisms of action potential sequences in relationship to observed patterns are seen as fundamental to neuroscientific understanding.

Neurons have an ability uncommon among the cells of the body to propagate signals rapidly over large distances by generating characteristic electrical pulses called action potentials: voltage spikes that can travel down axons. Sensory neurons change their activities by firing sequences of action potentials in various temporal patterns, with the presence of external sensory stimuli, such as light, sound, taste, smell and touch. Information about the stimulus is encoded in this pattern of action potentials and transmitted into and around the brain. Beyond this, specialized neurons, such as those of the retina, can communicate more information through graded potentials. These differ from action potentials because information about the strength of a stimulus directly correlates with the strength of the neurons' output. The signal decays much faster for graded potentials, necessitating short inter-neuron distances and high neuronal density. The advantage of graded potentials is higher information rates capable of encoding more states (i.e. higher fidelity) than spiking neurons.

Although action potentials can vary somewhat in duration, amplitude and shape, they are typically treated as identical stereotyped events in neural coding studies. If the brief duration of an action potential (about 1 ms) is ignored, an action potential sequence, or spike train, can be characterized simply by a series of all-or-none point events in time. The lengths of interspike intervals (ISIs) between two successive spikes in a spike train often vary, apparently randomly. The study of neural coding involves measuring and characterizing how stimulus attributes, such as light or sound intensity, or motor actions, such as the direction of an arm movement, are represented by neuron action potentials or spikes. In order to describe and analyze neuronal firing, statistical methods and methods of probability theory and stochastic point processes have been widely applied.

With the development of large-scale neural recording and decoding technologies, researchers have begun to crack the neural code and have already provided the first glimpse into the real-time neural code as memory is formed and recalled in the hippocampus, a brain region known to be central for memory formation. Neuroscientists have initiated several large-scale brain decoding projects.

The link between stimulus and response can be studied from two opposite points of view. Neural encoding refers to the map from stimulus to response. The main focus is to understand how neurons respond to a wide variety of stimuli, and to construct models that attempt to predict responses to other stimuli. Neural decoding refers to the reverse map, from response to stimulus, and the challenge is to reconstruct a stimulus, or certain aspects of that stimulus, from the spike sequences it evokes.^{[citation needed]}

A sequence, or 'train', of spikes may contain information based on different coding schemes. In some neurons the strength with which a postsynaptic partner responds may depend solely on the 'firing rate', the average number of spikes per unit time (a 'rate code'). At the other end, a complex 'temporal code' is based on the precise timing of single spikes. They may be locked to an external stimulus such as in the visual and auditory system or be generated intrinsically by the neural circuitry.

Whether neurons use rate coding or temporal coding is a topic of intense debate within the neuroscience community, even though there is no clear definition of what these terms mean.

The rate coding model of neuronal firing communication states that as the intensity of a stimulus increases, the frequency or rate of action potentials, or "spike firing", increases. Rate coding is sometimes called frequency coding.