Tubers are a type of enlarged structure that plants use as storage organs for nutrients, derived from stems or roots. Tubers help plants perennate (survive winter or dry months), provide energy and nutrients, and are a means of asexual reproduction.

Stem tubers manifest as thickened rhizomes (underground stems) or stolons (horizontal connections between organisms); examples include the potato and yam. The term root tuber describes modified lateral roots, as in sweet potato, cassava, and dahlia.

The term originates from the Latin tuber, meaning 'lump, bump, or swelling'.

Some writers limit the definition of tuber to structures derived from stems, while others also apply the term to structures derived from roots.

A stem tuber forms from thickened rhizomes or stolons. The top sides of the tuber produce shoots that grow into typical stems and leaves and the undersides produce roots. They tend to form at the sides of the parent plant and are most often located near the soil surface. The underground tuber is normally a short-lived storage and regenerative organ developing from a shoot that branches off a mature plant. The offspring or new tubers are attached to a parent tuber or form at the end of a hypogeogenous (initiated below ground) rhizome. In the autumn the plant dies, except for the new offspring tubers, which have one dominant bud that in spring regrows a new shoot producing stems and leaves; in summer the tubers decay and new tubers begin to grow. Some plants also form smaller tubers or tubercules that act like seeds, producing small plants that resemble (in morphology and size) seedlings. Some stem tubers are long-lived, such as those of tuberous begonias, but many plants have tubers that survive only until the plants have fully leafed out, at which point the tuber is reduced to a shriveled-up husk.^{[citation needed]}

Stem tubers generally start off as enlargements of the hypocotyl section of a seedling, but sometimes also include the first node or two of the epicotyl and the upper section of the root. The tuber has a vertical orientation, with one or a few vegetative buds on the top and fibrous roots produced on the bottom from a basal section. Typically the tuber has an oblong rounded shape.^{[citation needed]}

Tuberous begonias, yams, and cyclamens are commonly grown stem tubers. Mignonette vine (Anredera cordifolia) produces aerial stem tubers on 3.5-to-7.5-metre-tall (12 to 25 ft) vines; the tubers fall to the ground and grow. Plectranthus esculentus, of the mint family Lamiaceae, produces tuberous underground organs from the base of the stem, weighing up to 1.8 kg (3 lb 15 oz) per tuber, forming from axillary buds producing short stolons that grow into tubers. Even though legumes are not commonly associated with forming stem tubers, Lathyrus tuberosus is an example native to Asia and Europe, where it was once grown as a crop.

Potatoes are stem tubers – enlarged stolons thicken to develop into storage organs. The tuber has all the parts of a normal stem, including nodes and internodes. The nodes are the eyes and each has a leaf scar. The nodes or eyes are arranged around the tuber in a spiral fashion beginning on the end opposite the attachment point to the stolon. The terminal bud is produced at the farthest point away from the stolon attachment and tubers, and thus show the same apical dominance as a normal stem. Internally, a tuber is filled with starch stored in enlarged parenchyma-like cells. The inside of a tuber has the typical cell structures of any stem, including a pith, vascular zones, and a cortex.^{[citation needed]}