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Viral encephalitis
View on Wikipedia| Viral encephalitis | |
|---|---|
| Specialty | Infectious diseases |
Viral encephalitis is inflammation of the brain parenchyma, called encephalitis, by a virus. The different forms of viral encephalitis are called viral encephalitides. It is the most common type of encephalitis and often occurs with viral meningitis. Encephalitic viruses first cause infection and replicate outside of the central nervous system (CNS), most reaching the CNS through the circulatory system and a minority from nerve endings toward the CNS. Once in the brain, the virus and the host's inflammatory response disrupt neural function, leading to illness and complications, many of which frequently are neurological in nature, such as impaired motor skills and altered behavior.
Viral encephalitis can be diagnosed based on the individual's symptoms, personal history, such as travel history, and different clinical tests such as histology, medical imaging, and lumbar punctures. A differential diagnosis can also be done to rule out other causes of the encephalitis. Many encephalitic viruses often have characteristic symptoms of infection, helping to aid diagnosis. Treatment is usually supportive in nature while also providing antiviral drug therapy. The primary exception to this is herpes simplex encephalitis, which is treatable with acyclovir. Prognosis is good for most individuals who are infected by an encephalitic virus but is poor among those who develop severe symptoms, including viral encephalitis. Long-term complications of viral encephalitis typically relate to neurological damage, such as experiencing seizures, memory loss, and intellectual impairment.
Encephalitic viruses are typically transmitted either from person-to-person or are arthropod-borne viruses, called arboviruses. The young and the elderly are at the highest risk of viral encephalitis. Many cases of viral encephalitis are not identified either because of lack of testing or mild illness, and serological surveys indicate that asymptomatic infections are common. Various ways of preventing viral encephalitis exist, such as vaccines that are either in standard vaccination programs or which are recommended when living in or visiting certain regions, and various measures aimed at preventing mosquito, sandfly, and tick bites in order to prevent arbovirus infection.
Etiology
[edit]Many viruses are capable of causing encephalitis during infection, including:[1]
- Borna virus
- California encephalitis virus[2]
- Chandipura virus[3]
- Chikungunya virus[4]
- Cytomegalovirus
- Dengue virus
- Eastern equine encephalitis virus
- Enteroviruses
- Epstein-Barr virus
- Herpes simplex virus
- HIV[5]
- Human herpesvirus 6
- Human herpesvirus 7
- Influenza viruses[4][6]
- Inkoo virus[7]
- Jamestown Canyon virus[8]
- Japanese encephalitis virus
- La Crosse virus
- Lymphocytic choriomeningitis mammarenavirus[9]
- Measles virus
- Mumps virus
- Murray Valley encephalitis virus[10]
- Nipah virus
- Powassan virus[8]
- Rabies virus
- Rubella virus
- SARS-CoV-2[11]
- Snowshoe hare virus[7]
- St. Louis virus
- Tahyna virus[7]
- Tick-borne encephalitis virus
- Varicella-zoster virus, which causes both chickenpox and shingles
- Venezuelan equine encephalitis virus
- West Nile virus
- Western equine encephalitis virus
- Zika virus
Transmission
[edit]Encephalitic viruses vary in their manner of transmission. Some are transmitted from person-to-person, whereas others are transmitted by animals, especially bites from arthropods such as mosquitos, sandflies, and ticks, such viruses being called arboviruses.[12] An example of person-to-person transmission is the herpes simplex virus, which is transmitted by means of intimate physical contact.[13] An example of arboviral transmission is the West Nile virus, which usually is incidentally transmitted to people from the bites of Culex mosquitos, especially Culex pipiens.[14]
Pathogenesis
[edit]Viruses that cause viral encephalitis first infect the body and replicate outside of the central nervous system (CNS). Thereafter, most reach the spinal cord and brain via the circulatory system. Exceptions to this include herpesviruses and the rabies virus, which travel from nerve endings to the CNS. Once in the brain, the virus and the host's inflammatory response disrupt neural cell function, including causing fluid buildup in the brain, vascular congestion, and bleeding. Widespread presence of white blood cells and microglia in the CNS is common as a response to CNS infection. For some forms of viral encephalitis, such as Eastern equine encephalitis and Japanese encephalitis, there may be a significant amount of necrosis of nerve cells. Following encephalitis caused by arboviruses, calcification may occur in the CNS, especially among children. Herpes simplex encephalitis tends to produce necrotic lesions in the CNS.[1]
Diagnosis
[edit]Examination
[edit]If viral encephalitis is suspected, then questions can be asked about the individual's history and physical examination can be performed. Important aspects of one's history include immune status, exposure to animals, including insects, travel history, vaccination history, geography, and time of year. Symptoms usually occur acutely,[4] and the most common symptoms of infection are fever, headache, altered mental status, sensitivity to light, stiff neck and back, vomiting, confusion, and, in severe cases, seizures, paralysis, and coma. Neuropsychiatric features such as behavioral changes, hallucinations, or cognitive decline are frequent. Severe symptoms are most common among infants and the elderly. Most infections are asymptomatic, lacking symptoms, whereas most symptomatic cases are mild illnesses.[1][12]
Virus-specific symptoms may also exist or tests may indicate one virus. Specific examples include:[1]
- Enterovirus 71 may cause tremors, twitching, impaired balance and coordination, fluid accumulation in the lungs, and cranial nerve palsies.
- Epstein-Barr virus encephalitis is usually accompanied by enlargement of the lymph nodes and enlargement of the spleen
- Herpes zoster encephalitis may be accompanied by rash and skin vesicles, and because it involves the frontal lobe and temporal lobe, is often characterized by psychiatric features, memory deficits, and loss of language faculties.
- Many arboviral encephalitides, such as Japanese encephalitis, primarily affect the basal ganglia, sometimes causing motor symptoms such as involuntary movements and movements similar to those observed in Parkinson's disease.
- Nipah virus may produce brainstem and cerebellar signs, hypertension, and segmental myoclonus, or twitching of a group of connected muscles.
- Zika virus characteristically may cause microcephaly among newborn children if a pregnant woman is infected.
Histology
[edit]The brain histology of viral encephalitis shows dead neurons with nuclear dissolution and elevated eosinophil count, called hypereosinophilia, within cells' cytoplasm when viewed with an optical microscope. Because encephalitis is an inflammatory response, inflammatory cells situated near blood vessels, such as microglia, macrophages, and lymphocytes, are visible. Virions within neurons are visible via electron microscopes.[1]
Clinical evaluation
[edit]| Virus | Preferred diagnostic test |
|---|---|
| Cytomegalovirus | CSF PCR or CSF-specific IgM |
| Dengue/Chikungunya/Zika | CSF PCR or CSF-specific IgM |
| Enterovirus | Stool and throat PCR are preferred over CSF PCR |
| Epstein-Barr virus | Serum EBV capsid antigen IgG and IgM (VCA) and EBV nuclear antigen IgG (EBNA) |
| Herpes simplex virus | CSF PCR, can be repeated within 2 to 7 days of disease onset if negative with high clinical suspicion; or CSF for HSV-IgG after 10–14 days of disease onset |
| HHV-6 | CSF PCR paired with serum PCR to exclude viral integration into host DNA that causes false positives |
| Influenza | Culture, antigen test, PCR of respiratory secretions |
| Measles | CSF-specific IgG |
| Varicella-zoster virus | CSF-specific IgG |
Neuroimaging and lumbar puncture (LP) are both essential methods of diagnosing viral encephalitis. Computed tomography (CT) or magnetic resonance imaging (MRI) help identify increased intracranial pressure and the risk of uncal herniation before performing an LP. Cerebrospinal fluid (CSF), if analyzed, should be analyzed for opening pressure, cell counts, glucose, protein, and IgG and IgM antibodies. CSF testing should also include polymerase chain reaction (PCR) testing for herpes simplex viruses 1 and 2 and enteroviruses. About 10% of patients have normal CSF results. Additional testing, such as serology for various arboviruses and HIV testing, may also be performed based on the individual's history and symptoms. Brain biopsy and body fluid specimen cultures and PCR may also be useful in some cases. Electroencephalography (EEG) is abnormal in more than 80% of viral encephalitis cases, including those who are experiencing seizures, and may need to be monitored continuously to identify non-convulsive status. Lack of testing resources may prevent accurate diagnosis.[1][4]
Test results specific to certain viruses include:[1]
- For herpes simplex virus encephalitis, a CT scan may show low-density lesions in the temporal lobe. These lesions usually appear 3 to 5 days after the start of the infection.
- Japanese encephalitis often has distinct EEG patterns, including diffuse delta activity with spikes, diffuse continuous delta activity, and alpha coma activity.
Differential diagnosis
[edit]A broad differential diagnosis can be performed that looks at many potential causes of the encephalitis, infectious and noninfectious. Potential alternatives to viral encephalitis include malignancy, autoimmune or paraneoplastic diseases such as anti-NMDA receptor encephalitis, a brain abscess, tuberculosis or drug-induced delirium, exposure to certain drugs or toxins, neurosyphilis, vascular disease, metabolic disease, or encephalitis from infection caused by a bacterium, fungus, protozoan, or parasitic worm.[1][6][13] In children, differential diagnosis may not be able to distinguish between viral encephalitis and immune-mediated inflammatory CNS diseases, such as acute disseminated encephalomyelitis, as well as immune-mediated encephalitis, so other diagnostic methods may need to be used.[4]
Treatment
[edit]Treatment of viral encephalitis is primarily supportive with intravenous antiviral therapy due to there being no specific medical therapy for most viral infections involving the central nervous system. Individuals may require intensive care for frequent neurological exams or respiratory support, and treatment for electrolyte disturbance, autonomic disregulation, and renal and hepatic dysfunction, as well as for seizures and non-compulsive status epilepticus.[1][4]
A very specific exception is herpes simplex virus (HSV) encephalitis, which can be treated with acyclovir for 2 to 3 weeks if it is provided early enough. Acyclovir significant decreases morbidity and mortality of HSV encephalitis and limits the long-term behavioral and cognitive impairments that occur with illness. As such, and because HSV is the most common cause of viral encephalitis, acyclovir is often administered as soon as possible to all patients suspected of having viral encephalitis even if the exact viral origin is not yet known. Viral resistance to acyclovir rarely occurs, primarily among the immunocompromised, in which case foscarnet should be used. Although not as effective, nucleoside analogs are used for other herpesviruses as well, such as acyclovir, with possible adjunctive corticosteroids for immunocompetent individuals, for varicella-zoster virus encephalitis and a combination of ganciclovir and foscarnet for cytomegalovirus encephalitis.[1][13]
Serial intracranial pressure (ICP) is important to monitor as elevated ICP is associated with poor prognosis. Elevated ICP can be relieved with steroids and mannitol, though there is limited data of the efficacy of such treatment with regards to viral encephalitis. Seizures can be managed with valproic acid or phenytoin. Status epilepticus may required benzodiazepines. Antipsychotic drugs may be needed for a short time period if behavior alternations are present. Given the possibility of complications developing from viral encephalitis, an interdisciplinary team consisting of the clinicians, therapists, rehabilitation specialists, and speech therapists is important in order to help patients.[1]
Prognosis
[edit]If treated, most individuals recover from viral encephalitis without long-term problems related to the illness. Mortality rates vary for those who do not receive treatment, for example being about 70% for herpes encephalitis[13] but low for the La Crosse virus. Individuals who remain symptomatic after initial infection may have difficulty concentrating, behavior or speech disorders, or memory loss. Rarely, individuals may remain in a persistent vegetative state. The most common long-term complication of viral encephalitis is seizures that may occur in 10% to 20% of patients over several decades. These seizures are resistant to medical therapy. However, individuals who have unilateral mesial temporal lobe seizures after viral encephalitis have good results following neurosurgery. Prognoses related to specific viruses include:[1]
- For Eastern equine encephalitis, some children may experience seizures, severe intellectual disability, and various forms of paralysis.
- For Japanese encephalitis, extrapyramidal symptoms relating to motor function may remain.
- For St. Louis encephalitis, low blood sodium level and excess, unsuppressable release of antidiuretic hormone
- For Western equine encephalitis, some children may experience seizures and behavioral changes.
- For pregnant women infected with Zika virus, the newborn child may have microcephaly.
Other potential complications following viral encephalitis include:[1]
- Encephalopathy
- Flaccid paralysis
- Impaired intelligence
- Low blood sodium level
- Mononeuropathy
- Mood and behavioral changes
- Residual neurological deficits
Epidemiology
[edit]While the etiology of many cases of encephalitis is unknown, viruses account for about 70% of confirmed encephalitis cases, with the herpes simplex virus being the most common cause at about 50% of encephalitis cases.[13] The incidence of viral encephalitis is about 3.5 to 7.5 per 100,000 people, with the highest incidence among the young and the elderly. Viral encephalitis caused by some viruses, such as the measles virus and the mumps virus, has become less common due to widespread vaccination. For others, such as Epstein-Barr virus and cytomegalovirus, incidence has increased due to the increased prevalence of AIDS, organ transplantation, and chemotherapy, which have increased the number of immunocompromised people who have weakened immune systems or who are susceptible to opportunistic infections. Time of the year, geography, and animal, including insect, exposure are also important. For example, arbovirus infections are seasonal and cause viral encephalitis at the highest rate during the summer and early fall when mosquitos are most active. Similarly, those who live in warm, humid climates where there are more mosquitos are more likely to experience viral encephalitis.[1][6]
Prevention
[edit]As many encephalitic viruses are transmitted by mosquitos, many prevention efforts revolve around preventing mosquito bites. In areas where such arboviruses are widespread, people should use protective clothing and should sleep under a mosquito net. Removing containers of stagnant water and spraying insecticides can be beneficial. Activities that increase the likelihood of tick bites should be avoided. Vaccines against some arboviruses that cause viral encephalitis exist, such as those against Eastern equine encephalitis, Western equine encephalitis, and Venezuelan equine encephalitis. Although these vaccines are not perfectly effective, they are recommended for people who live in or travel to high-risk areas.[1][6] Some vaccines that are included in standard vaccination programs, such as the MMR vaccine, which prevents measles, mumps, and rubella, are also capable of preventing viral encephalitis.[15]
See also
[edit]References
[edit]- ^ a b c d e f g h i j k l m n o Said, S.; Kang, M. (16 December 2019). Viral encephalitis. StatPearls Publishing LLC. PMID 29262035. Retrieved 28 March 2020.
- ^ Hammon, W. M.; Reeves, W. C. (1952). "California encephalitis virus, a newly described agent". Calif Med. 77 (5): 303–309. PMC 1521486. PMID 13009479.
- ^ Ghosh, S.; Basu, A. (January–February 2017). "Neuropathogenesis by Chandipura virus: An acute encephalitis syndrome in India". Natl Med J India. 30 (1): 21–25. PMID 28731002.
- ^ a b c d e f g Costa, B. K. D.; Sato, D. K. (2020). "Viral encephalitis: a practical review on diagnostic approach and treatment". Jornal de Pediatria. 96 (Suppl. 1): 12–19. doi:10.1016/j.jped.2019.07.006. PMC 9431993. PMID 31513761.
- ^ Chen, Z.; Zhong, D.; Li, G (2019). "The role of microglia in viral encephalitis: a review". J Neuroinflammation. 16 (1): 76. doi:10.1186/s12974-019-1443-2. PMC 6454758. PMID 30967139.
- ^ a b c d "Understanding encephalitis -- the basics". WebMD. 26 March 2019. Retrieved 27 March 2020.
- ^ a b c Evans, A. B.; Winkler, C. W.; Peterson, K. E. (2019). "Differences in Neuropathogenesis of Encephalitic California Serogroup Viruses". Emerg Infect Dis. 25 (4): 728–738. doi:10.3201/eid2504.181016. PMC 6433036. PMID 30882310.
- ^ a b Pastula, D. M.; Smith, D. E.; Beckham, J. D.; Tyler, K. L. (2016). "Four emerging arboviral diseases in North America: Jamestown Canyon, Powassan, chikungunya, and Zika virus diseases". J Neurovirol. 22 (3): 257–260. doi:10.1007/s13365-016-0428-5. PMC 5087598. PMID 26903031.
- ^ Lavergne, A.; de Thoisy, B.; Tirera, S.; Donato, D.; Bouchier, C.; Catzeflies, F.; Lacoste, V. (2016). "Identification of lymphocytic choriomeningitis mammarenavirus in house mouse (Mus musculus, Rodentia) in French Guiana". Infect Genet Evol. 37: 225–230. doi:10.1016/j.meegid.2015.11.023. PMID 26631809.
- ^ Mackenzie, J. S.; Lindsay, M. D. A.; Smith, D. W.; Imrie, A (2017). "The ecology and epidemiology of Ross River and Murray Valley encephalitis viruses in Western Australia: examples of One Health in Action". Trans R Soc Trop Med Hyg. 111 (6): 248–254. doi:10.1093/trstmh/trx045. PMC 5914307. PMID 29044370.
- ^ Carod-Artal, F. J. (1 May 2020). "Neurological Complications of Coronavirus and COVID-19". Revista de Neurología. 70 (9): 311–322. doi:10.33588/rn.7009.2020179. PMID 32329044. S2CID 226200547.
- ^ a b "Encephalitis, Viral". World Health Organization. Archived from the original on May 16, 2006. Retrieved 27 March 2020.
- ^ a b c d e Bradshaw, M. J.; Venkatesan, A. (2016). "Herpes Simplex Virus-1 Encephalitis in Adults: Pathophysiology, Diagnosis, and Management". Neurotherapeutics. 13 (3): 493–508. doi:10.1007/s13311-016-0433-7. PMC 4965403. PMID 27106239.
- ^ "West Nile Virus". World Health Organization. 3 October 2017. Retrieved 27 March 2020.
- ^ "Understanding encephalitis -- prevention". WebMD. 26 March 2019. Retrieved 27 March 2020.
External links
[edit]Viral encephalitis
View on GrokipediaIntroduction
Definition
Viral encephalitis is defined as an inflammation of the brain parenchyma—the functional tissue of the brain—resulting from direct infection by a virus, which leads to an acute onset of neurological dysfunction such as altered mental status, seizures, or focal deficits.[1] This condition represents the most common form of encephalitis and frequently occurs alongside viral meningitis, though the primary pathology targets the brain tissue itself rather than solely the surrounding meninges.[1] Unlike meningitis, which primarily involves inflammation of the meninges (the protective membranes enveloping the brain and spinal cord), viral encephalitis specifically affects the brain parenchyma, potentially causing more severe and diffuse neurological impairment.[4] It is also distinct from encephalomyelitis, a broader syndrome that encompasses both brain and spinal cord inflammation, often seen in certain viral infections like those from enteroviruses.[1] The recognition of viral encephalitis as a distinct entity emerged in the early 20th century, with initial cases linked to rabies virus—known since ancient times but confirmed as viral in the late 19th century—and herpes simplex virus, whose encephalitic form was first systematically described around 1926.[5][6] These early observations laid the foundation for understanding viral invasion of the central nervous system as a cause of acute brain inflammation.[7]Classification
Viral encephalitis is primarily classified according to the causative viral agents, which are grouped by their taxonomic families. The herpesvirus family (Herpesviridae) includes key pathogens such as herpes simplex virus type 1 (HSV-1), varicella-zoster virus (VZV), Epstein-Barr virus (EBV), cytomegalovirus (CMV), and human herpesviruses 6 and 7 (HHV-6 and HHV-7), with HSV-1 being the most common cause in adults in developed countries. Arboviruses, transmitted by arthropods, encompass flaviviruses like West Nile virus (WNV) and Japanese encephalitis virus (JEV), as well as alphaviruses such as Eastern equine encephalitis virus (EEEV), Western equine encephalitis virus (WEEV), and Venezuelan equine encephalitis virus (VEEV); these often predominate in endemic regions with seasonal outbreaks. Enteroviruses from the Picornaviridae family, notably enterovirus 71 (EV71), are significant in pediatric cases, particularly in Asia. Paramyxoviruses (Paramyxoviridae), including measles virus, mumps virus, and Nipah virus, contribute to encephalitis through direct neurotropism or post-infectious mechanisms. Other viruses, such as rabies virus (Rhabdoviridae) and influenza viruses (Orthomyxoviridae), represent additional categories, with rabies causing nearly invariably fatal acute encephalitis worldwide.[1][8][9] Secondary classification schemes further delineate viral encephalitis based on epidemiological patterns, temporal progression, and anatomical involvement. Forms are distinguished as sporadic, such as those caused by HSV-1, versus epidemic or seasonal outbreaks, exemplified by arboviral infections like WNV in North America during summer months or JEV in rural Asia. Progression is categorized as acute, with rapid onset over days (e.g., HSV or rabies), versus subacute, developing over weeks (e.g., certain influenza-associated cases or progressive forms like subacute sclerosing panencephalitis from measles). Involvement may be focal, often targeting specific brain regions like the temporal lobes in HSV encephalitis, or diffuse, affecting widespread areas such as the basal ganglia in arboviral cases. Geographic patterns influence prevalence, with herpesviruses causing ubiquitous sporadic disease, arboviruses tied to vector distribution in tropical and temperate zones, and enteroviral outbreaks linked to sanitation in densely populated areas.[1][10][8] Related conditions include post-infectious or para-infectious encephalitis, where neurological inflammation arises from immune-mediated responses following a viral infection, rather than direct viral invasion of the brain, as seen with SARS-CoV-2. These manifestations, reported increasingly since 2020, include autoimmune encephalitis triggered weeks after COVID-19 infection, often involving autoantibodies against neuronal antigens and presenting with subacute symptoms in diverse global settings. As of 2025, such cases highlight immune-mediated encephalitides triggered by viruses, distinct from primary viral encephalitis.[11][12]Etiology
Viral Agents
Viral encephalitis is primarily caused by a range of neurotropic viruses that can invade the central nervous system (CNS), with herpes simplex virus type 1 (HSV-1) being the most common agent in adults, accounting for approximately 10-20% of cases in developed countries.[1] HSV-1, a double-stranded DNA virus from the Herpesviridae family, establishes latency in the trigeminal ganglia and reactivates to cause focal necrotizing encephalitis predominantly affecting the temporal and frontal lobes.[13] In neonates, HSV-2 is more prevalent, often acquired perinatally, with central nervous system (CNS) involvement occurring in approximately 30% of cases, often as part of disseminated disease.[13][14] Arboviruses, transmitted by arthropod vectors, represent a major global cause of encephalitis, particularly in endemic regions. West Nile virus (WNV), a single-stranded positive-sense RNA flavivirus, is the leading arboviral agent in North America and Europe, with neuroinvasive disease occurring in less than 1% of infections but carrying a 10% mortality rate.[1] Japanese encephalitis virus (JEV), another flavivirus, is endemic in Asia, causing over 67,000 cases annually and targeting subcortical structures like the thalamus and basal ganglia.[15] Other arboviruses include La Crosse virus (a bunyavirus endemic to the US Midwest and South, primarily causing severe encephalitis in children) and St. Louis encephalitis virus (a flavivirus causing sporadic outbreaks in the Americas, with higher neuroinvasive risk in older adults).[1] Tick-borne encephalitis virus (TBEV), a flavivirus prevalent in Europe and Asia, affects forested areas and leads to biphasic illness with meningoencephalitis in severe cases.[13] Enteroviruses, non-polio members of the Picornaviridae family such as coxsackieviruses and echoviruses, are frequent causes of encephalitis in children, particularly during summer outbreaks, with Enterovirus 71 being associated with rhombencephalitis and a high risk of neurological sequelae.[1] These single-stranded RNA viruses exhibit strong neurotropism, often entering the CNS via retrograde axonal transport from the gastrointestinal tract.[13] Other notable agents include varicella-zoster virus (VZV), a DNA herpesvirus that reactivates from latency in dorsal root ganglia to cause encephalitis, especially in immunocompromised individuals.[16] Epstein-Barr virus (EBV), also from the Herpesviridae family, can cause encephalitis through direct CNS invasion or immune-mediated mechanisms, often presenting in children as part of infectious mononucleosis or in immunocompromised hosts. Cytomegalovirus (CMV), another herpesvirus, primarily causes encephalitis in neonates via congenital infection or in immunocompromised adults, leading to ventriculoencephalitis with periventricular involvement.[1] Rabies virus, a single-stranded negative-sense RNA lyssavirus, is nearly 100% fatal once symptomatic and spreads retrogradely along peripheral nerves from animal bites.[13] Post-infectious encephalitis can follow measles virus infection, a paramyxovirus causing subacute sclerosing panencephalitis years later in unvaccinated children.[1] Human immunodeficiency virus (HIV), a retrovirus, induces chronic encephalitis in advanced AIDS through direct neuronal infection and immune dysregulation.[13] Influenza A virus, an orthomyxovirus, rarely causes direct encephalitis but can trigger it via immune-mediated mechanisms during severe respiratory infections.[1] As of 2025, there has been increased recognition of Zika virus and dengue virus as emerging causes of encephalitis in tropical regions, driven by climate change and urbanization. Zika virus, a flavivirus, has been linked to acute encephalitis with altered consciousness and seizures in adults, alongside its well-known congenital effects.[17] Dengue virus, another flavivirus, is associated with encephalitis in severe cases, presenting with fever, altered mental status, and seizures, with neurologic sequelae reported in up to 20% of survivors in recent outbreaks.[18]Transmission
Viral encephalitis arises from infections by diverse viruses, each with distinct modes of transmission to humans, primarily involving direct contact, vector intermediaries, or zoonotic exposures from animal reservoirs. Transmission routes vary by viral agent, but common pathways include respiratory droplets, fecal-oral spread, and arthropod vectors, facilitating entry into the human host before potential central nervous system involvement.[7] Direct person-to-person transmission occurs via respiratory droplets for viruses like measles and mumps, where infected individuals expel virus-laden aerosols through coughing, sneezing, or close contact, allowing airborne or droplet spread to susceptible hosts. Enteroviruses, another key cause, are mainly transmitted through the fecal-oral route, often via contaminated hands, water, or food, with viral shedding in feces persisting for weeks after infection. Rabies virus, while zoonotic in origin, requires close contact such as bites or scratches from infected mammals, introducing saliva containing the virus into wounds or mucous membranes.[19][20][21][22] Vector-borne transmission predominates for arboviruses causing encephalitis, with mosquitoes serving as primary vectors for pathogens like West Nile virus and Japanese encephalitis virus; infected female mosquitoes acquire the virus from feeding on viremic animals and transmit it to humans during blood meals, particularly in endemic regions during warmer months. Similarly, tick-borne encephalitis virus is spread through bites from infected Ixodes ticks, which acquire the virus from small mammals or birds and can transmit it rapidly upon attachment, with rare alimentary transmission via unpasteurized milk from infected livestock. Humans act as dead-end hosts for most arboviruses, meaning no sustained human-to-human spread occurs, though exceptional cases involve blood transfusions or organ transplants.[23][24][25] Additional routes include perinatal transmission, as seen with herpes simplex virus type 2 (HSV-2), where the virus passes from mother to neonate during vaginal delivery if maternal genital lesions are present, leading to severe neonatal encephalitis. Iatrogenic transmission is uncommon but documented in contexts like organ transplantation or blood products contaminated with viruses such as rabies or West Nile, underscoring the role of animal reservoirs in maintaining zoonotic cycles without routine human intermediary spread.[26][22][23]Pathophysiology
Pathogenesis
Viral encephalitis arises from the invasion of the central nervous system (CNS) by various neurotropic viruses, which employ distinct routes to breach protective barriers and establish infection. The primary entry pathways include hematogenous spread, where viruses cross the blood-brain barrier (BBB) either directly or via infected leukocytes that act as Trojan horses, facilitating viral transport into the brain parenchyma. Neural retrograde transport represents another key mechanism, exemplified by herpes simplex virus (HSV) traveling along the olfactory nerve from peripheral sites of entry such as the nasal mucosa. In congenital cases, transplacental transmission allows viruses like Zika or cytomegalovirus to infect the fetal CNS directly during gestation. Once within the CNS, viruses replicate primarily in neurons and glial cells, leading to lytic infection that disrupts cellular function and triggers programmed cell death through apoptosis. This replication process often induces a cytokine storm, characterized by excessive release of pro-inflammatory mediators such as tumor necrosis factor-alpha (TNF-α) and interleukin-6 (IL-6), which contribute to vasogenic edema and increased intracranial pressure. The resultant cellular damage compromises neuronal integrity and synaptic transmission, propagating the pathological cascade. The host immune response exacerbates CNS damage through both innate and adaptive mechanisms. Type I interferon signaling, activated early in infection, limits viral spread but can lead to neurotoxicity if dysregulated. Subsequent T-cell infiltration across the compromised BBB mounts a cytotoxic response against infected cells, causing collateral inflammation and further tissue injury via perforin and granzyme release. This immune-mediated pathology often amplifies the direct viral effects, distinguishing viral encephalitis from milder neurotropic infections. Virus-specific mechanisms highlight the diversity of pathogenesis. HSV exhibits tropism for the temporal lobe, where it establishes latency in sensory ganglia before reactivating to cause necrotizing encephalitis through targeted neuronal lysis. In contrast, West Nile virus disrupts BBB integrity by infecting endothelial cells and upregulating matrix metalloproteinases, enabling unchecked viral dissemination and hemorrhagic lesions. These tailored strategies underscore how viral genetics and host factors dictate disease severity and localization.Neuropathology
Viral encephalitis induces characteristic gross pathological changes in the brain, including cerebral edema, vascular congestion, and focal necrosis. Edema results from increased vascular permeability and inflammatory responses, leading to brain swelling that can cause herniation in severe cases. Necrotic areas may appear hemorrhagic, particularly in infections like herpes simplex virus (HSV), where petechiae and ecchymoses are evident in affected regions.[1][14] Microscopically, the neuropathology features perivascular cuffing by inflammatory cells such as lymphocytes, macrophages, and microglia, alongside neuronal degeneration with nuclear dissolution and cytoplasmic hypereosinophilia. Neuronal inclusions are prominent in certain viruses, exemplified by Negri bodies—eosinophilic cytoplasmic aggregates of viral ribonucleoproteins—in rabies-infected neurons, particularly in the hippocampus and Purkinje cells. Gliosis, characterized by astrocytic proliferation and hypertrophy, accompanies neuronal loss, while demyelination occurs in select cases, such as those involving coronaviruses or other RNA viruses that trigger immune-mediated white matter damage.[1][8] Virus-specific pathologies highlight regional vulnerabilities: HSV encephalitis predominantly causes hemorrhagic necrosis in the temporal lobes, limbic structures, and orbitofrontal cortex, with Cowdry type A intranuclear inclusions in neurons. Arboviral infections, such as those from Eastern equine encephalitis or Japanese encephalitis viruses, often involve the thalamus, basal ganglia, and pons, featuring neuronal loss, microglial nodules, and calcification in chronic phases among pediatric cases. Enteroviral encephalitis, particularly rhombencephalitis from enterovirus 71, targets the brainstem (medulla, pons, and midbrain), with inflammation, neuronophagia, and focal necrosis in the reticular formation and cranial nerve nuclei.[14][8] Long-term sequelae include scarring (gliotic fibrosis) in necrotic zones and hippocampal atrophy, which contribute to epilepsy in up to 20% of survivors by disrupting neural circuits. These changes, observed in postmortem examinations and imaging follow-ups, reflect persistent neuronal dropout and reactive gliosis following the acute inflammatory insult.[8][27][28]Clinical Manifestations
Signs and Symptoms
Viral encephalitis often begins with a prodromal phase lasting 1 to 7 days, characterized by nonspecific symptoms such as fever, headache, malaise, myalgia, and gastrointestinal upset, which vary depending on the causative virus.[1] This phase may mimic a flu-like illness and is reported in most cases of arboviral encephalitides and herpes simplex virus (HSV) infections.[1] The acute neurological phase typically follows, marked by altered mental status ranging from mild confusion and disorientation to lethargy, stupor, or coma, occurring in many patients with neuroinvasive disease.[29] Seizures, either focal or generalized, affect many cases with incidence varying by etiology (e.g., 7-50% in Japanese encephalitis) and may be the presenting feature, particularly in children and those with HSV encephalitis.[1][30] Focal neurological deficits, such as hemiparesis, aphasia, or cranial nerve palsies, can emerge due to localized brain involvement, with aphasia being prominent in temporal lobe-predominant infections like HSV.[14] Autonomic and behavioral manifestations include persistent fever spikes, vomiting, tachycardia, and hypertension, alongside psychiatric symptoms such as agitation, irritability, hallucinations, or personality changes, which reflect involvement of limbic and hypothalamic structures.[31] These features contribute to the acute presentation and may precede full encephalitic symptoms by hours to days.[1] Virus-specific signs further guide clinical suspicion. In HSV encephalitis, prominent behavioral and personality alterations, including memory impairment and dysphasia, often accompany temporal lobe dysfunction.[14] Rabies encephalitis classically features hydrophobia (involuntary spasms triggered by water attempts) and aerophobia (fear of air drafts), alongside hypersalivation, dysphagia, and extreme agitation during the acute phase.[32] West Nile virus encephalitis may present with flaccid paralysis resembling acute poliomyelitis, involving asymmetric limb weakness and areflexia due to anterior horn cell damage, in addition to tremors or myoclonus.[33]Complications
Viral encephalitis can lead to severe acute complications that threaten life and exacerbate neurological damage. Cerebral edema is a common acute issue, often resulting in increased intracranial pressure and potentially fatal brain herniation, as observed in cases of H1N1 influenza encephalitis and Epstein-Barr virus infection. Status epilepticus frequently complicates the acute phase, occurring in a substantial proportion of patients and serving as a key risk factor for subsequent epilepsy, particularly in herpes simplex virus (HSV) encephalitis. Secondary bacterial infections may arise due to immunosuppression or prolonged hospitalization, contributing to worsened outcomes in conditions like influenza-associated encephalitis. Long-term neurological sequelae affect many survivors, with cognitive impairment being prevalent, including deficits in memory, attention, and executive function, as documented in systematic reviews of infectious encephalitis cases. Epilepsy develops in up to 22% of patients with viral encephalitis who experience early seizures, with higher risks linked to factors such as coma, abnormal MRI findings, and HSV detection in cerebrospinal fluid.[34] Movement disorders, including parkinsonism, are notable in specific etiologies like Japanese encephalitis, where substantia nigra involvement leads to persistent symptoms such as hypophonia and dystonia in survivors. Systemic complications, though less common, include the syndrome of inappropriate antidiuretic hormone secretion (SIADH), which manifests as hyponatremia in over 50% of HSV encephalitis cases and requires fluid management.[35] Rhabdomyolysis has been reported in association with West Nile virus encephalitis and HSE, potentially triggered by seizures or direct viral effects on muscle tissue, leading to acute kidney injury in severe instances. Rare psychiatric disorders may emerge post-recovery, encompassing mood disturbances, psychosis, and behavioral changes, as seen in sequelae of Nipah virus and HSV encephalitis.Diagnosis
Clinical Evaluation
The clinical evaluation of suspected viral encephalitis commences with a comprehensive history to identify potential exposures and risk factors that guide differential diagnosis. Recent travel to endemic regions, such as areas with arboviral activity in the Midwest or South of the United States, is a critical inquiry, as it may indicate infections like St. Louis encephalitis transmitted via mosquitoes.[1] Exposure history should encompass insect bites, animal contact, or tick encounters, which can suggest specific etiologies including rabies following animal bites.[36] Vaccination status must be reviewed, particularly for measles and mumps, as immunization reduces the incidence of these vaccine-preventable encephalitides.[1] A prodromal phase often precedes neurological symptoms, featuring fever, headache, malaise, or upper respiratory illness within days to weeks prior.[1] Immunosuppression from conditions such as HIV/AIDS, organ transplantation, or chemotherapy heightens risk for opportunistic viruses like cytomegalovirus (CMV) or Epstein-Barr virus (EBV).[1] Physical examination prioritizes vital signs and a thorough neurological assessment to detect acute changes. Fever, typically ≥38°C, is a hallmark finding occurring within 72 hours of presentation, often accompanied by tachycardia.[36] Neurological evaluation includes assessment of mental status for alterations such as lethargy, confusion, or behavioral changes persisting ≥24 hours, along with screening for seizures or focal deficits like aphasia or hemiparesis.[1] Meningeal signs, including nuchal rigidity and Kernig's sign, should be elicited to evaluate for irritation.[37] Certain features during evaluation signal high urgency, known as red flags. Rapid deterioration in mental status or neurological function necessitates immediate escalation of care.[38] A concurrent rash may point to enteroviral causes, while recent animal contact heightens suspicion for rabies encephalitis.[36][1] Presentations vary by age group, influencing evaluation sensitivity. In neonates and young children, symptoms often manifest as irritability, poor feeding, or prominent seizures rather than focal deficits, with enteroviruses being a common etiology in this population.[36] Elderly patients may exhibit subtler signs, such as mild confusion without fever, due to underlying immunosuppression or comorbidities, leading to delayed recognition despite severe potential outcomes.[9]Laboratory Investigations
Laboratory investigations for viral encephalitis primarily involve analysis of cerebrospinal fluid (CSF), blood, and occasionally other specimens to detect viral pathogens through microbiological and biochemical methods. These tests are crucial for identifying the etiologic agent, guiding targeted therapy, and distinguishing viral from other causes of encephalitis.[39] CSF analysis is the cornerstone of laboratory evaluation, typically revealing lymphocytic pleocytosis (white blood cell count >5 cells/mm³, predominantly lymphocytes), mildly elevated protein levels (often 50-100 mg/dL), and normal glucose concentration, which helps support a viral etiology.[39] In up to 10% of cases, CSF findings may be normal, particularly early in the disease course.[39] Polymerase chain reaction (PCR) testing on CSF is recommended for detecting nucleic acids of common viruses, including herpes simplex virus (HSV; sensitivity 96%-98%, specificity 95%-99%), enteroviruses, and arboviruses such as West Nile virus (though positivity rates for the latter may be <60%).[39] HSV PCR should be performed on all suspected cases, with repeat testing in 3-7 days if initial results are negative but clinical suspicion remains high.[39] Multiplex PCR panels, capable of detecting multiple pathogens simultaneously (e.g., 14 common encephalitis/meningitis agents), have become standard by 2025 for rapid, comprehensive screening.[40] Blood tests complement CSF analysis and include serologic assays for virus-specific antibodies, such as IgM and IgG for West Nile virus, where CSF IgM indicates neuroinvasive disease.[39] Acute and convalescent serum samples for IgG seroconversion can provide retrospective confirmation.[39] A complete blood count (CBC) often shows relative lymphocytosis, reflecting the systemic immune response, though findings are nonspecific.[41] Viral cultures from blood are rarely used due to low yield and the superiority of molecular methods like PCR.[39] Additional specimens, such as throat swabs and stool samples, are particularly useful for enterovirus detection via PCR or culture.[42] These non-invasive tests are guided by clinical and epidemiologic clues, such as seasonal outbreaks. For cases where standard PCR panels are negative but suspicion remains high, metagenomic next-generation sequencing (mNGS) of CSF can identify rare or novel pathogens, offering unbiased detection with reported diagnostic yields up to 65% in undiagnosed infectious encephalitis as of 2025.[43] Limitations of these investigations include potential false-negative PCR results in patients who have received prior antiviral treatment or present late in the illness, when viral load may be low; in such scenarios, serology or repeat testing may be necessary.[39]Imaging and Electrophysiology
Magnetic resonance imaging (MRI) is the preferred modality for evaluating brain parenchymal involvement in viral encephalitis, offering superior sensitivity over computed tomography (CT) for detecting early inflammatory changes.[44] Common MRI findings include T2-weighted and fluid-attenuated inversion recovery (FLAIR) hyperintensities in affected regions, reflecting vasogenic or cytotoxic edema.[44] Diffusion-weighted imaging (DWI) frequently demonstrates restricted diffusion in areas of acute neuronal injury or ischemia, particularly in the acute phase.[44] In contrast, non-contrast CT serves as an initial screening tool to identify gross abnormalities such as cerebral edema, mass effect, or herniation, which may necessitate urgent intervention before lumbar puncture.[45] Herpes simplex virus (HSV) encephalitis exhibits a characteristic limbic-predominant pattern on MRI, with T2/FLAIR hyperintensities predominantly involving the temporal lobes, insular cortex, and cingulate gyrus, often asymmetrically bilateral; petechial hemorrhages may appear after 48 hours, and DWI restriction is common in the temporal regions.[44] Japanese encephalitis, by comparison, shows T2/FLAIR hyperintensities in the bilateral thalami (in up to 98% of cases) and basal ganglia (in approximately 61% of cases), with involvement of the caudate and lentiform nuclei being frequent; these changes are often asymmetrical and may extend to the midbrain or substantia nigra.[46] Electroencephalography (EEG) provides critical insights into cerebral electrical activity and is essential for detecting subclinical seizures or localizing dysfunction in viral encephalitis.[47] In HSV encephalitis, EEG commonly reveals periodic lateralized epileptiform discharges (PLEDs) or periodic sharp waves, typically unilateral or bilateral and originating from the temporal lobes, alongside focal slowing or attenuation of background rhythms.[47] For non-HSV viral encephalitides, EEG patterns are less specific but often include diffuse slowing of posterior dominant rhythms, indicating generalized encephalopathy, with epileptiform discharges occurring in about 28% of cases.[48] Advanced neuroimaging techniques such as positron emission tomography (PET) or single-photon emission computed tomography (SPECT) are occasionally utilized when MRI findings are subtle or negative, revealing hypometabolism in inflamed brain regions that correlates with clinical severity.[49] In HSV encephalitis, PET may highlight temporal lobe and limbic hypometabolism even early in the disease course.[50] Cerebral angiography is rarely indicated but can help differentiate viral encephalitis from vasculitic mimics by identifying segmental narrowing or beading in cases with atypical vascular involvement.[51]Differential Diagnosis
Viral encephalitis must be differentiated from a wide array of infectious and non-infectious conditions that present with acute or subacute encephalopathy, altered mental status, seizures, or focal neurological deficits, as misdiagnosis can lead to inappropriate treatment and worse outcomes.[1] The differential includes bacterial, mycobacterial, and fungal infections of the central nervous system (CNS), as well as autoimmune, paraneoplastic, metabolic, toxic, vascular, and psychiatric disorders.[52] Establishing the correct diagnosis relies on integrating clinical history, cerebrospinal fluid (CSF) analysis, neuroimaging, and targeted testing to identify discriminators specific to viral etiology.[1] Among infectious mimics, bacterial meningitis often presents with rapid onset of fever, nuchal rigidity, and photophobia, but is distinguished by CSF findings of neutrophilic pleocytosis, low glucose, and high protein levels, along with positive Gram stain or bacterial cultures.[1] Tuberculous meningitis typically follows a subacute course with cranial nerve palsies and basal meningeal enhancement on MRI, featuring CSF with lymphocytic predominance, low glucose, high protein, and acid-fast bacilli or PCR positivity for Mycobacterium tuberculosis.[52] Fungal infections, such as cryptococcal or histoplasmal meningitis, are more common in immunocompromised hosts and show CSF with low glucose, variable pleocytosis, and detection via India ink, antigen tests, or culture.[1] Non-viral infectious encephalitides, like those due to Listeria or syphilis, may overlap but are differentiated by specific serological or CSF PCR results.[52] Autoimmune and paraneoplastic encephalitides represent critical non-infectious mimics, often presenting with subacute psychiatric symptoms, movement disorders, or seizures, and may postdate a viral infection. Anti-N-methyl-D-aspartate receptor (anti-NMDAR) encephalitis, for instance, features prominent psychiatric manifestations, dyskinesias, and autonomic instability, with CSF showing lymphocytic pleocytosis and oligoclonal bands, alongside serum/CSF autoantibodies; MRI may be normal or show nonspecific medial temporal changes, and it does not respond to antivirals.[52] Paraneoplastic limbic encephalitis, associated with underlying tumors like small-cell lung cancer, manifests with memory loss, confusion, and hyponatremia, identified by paraneoplastic antibodies (e.g., anti-Hu or anti-Ma2) in CSF/serum and tumor screening via CT/PET; it shares temporal lobe involvement on MRI but lacks viral PCR positivity.[53] Non-infectious causes further broaden the differential. Metabolic encephalopathies, such as uremic or hepatic encephalopathy, arise from systemic derangements like renal failure or electrolyte imbalances, with normal CSF and reversible symptoms upon correction of the underlying abnormality.[1] Toxic encephalopathies from drugs (e.g., opioids, benzodiazepines) or toxins (e.g., carbon monoxide) present with altered consciousness and a clear exposure history, featuring normal CSF and EEG abnormalities without inflammation.[1] Vascular events like ischemic stroke or cerebral venous thrombosis cause focal deficits with abrupt onset, diagnosed by MRI showing infarcts or thrombi, and unremarkable CSF unless secondary inflammation occurs.[52] Psychiatric conditions, including delirium or catatonia, mimic encephalitis through behavioral changes but lack fever, CSF pleocytosis, or EEG epileptiform activity, responding instead to environmental or psychotropic interventions.[1] Key discriminators for viral encephalitis include an aseptic CSF profile with normal glucose, moderate lymphocytic pleocytosis (typically 10-500 cells/μL), and mildly elevated protein, often with negative bacterial/fungal studies but positive viral PCR (e.g., for herpes simplex virus [HSV]).[1] MRI patterns aid distinction: HSV encephalitis shows temporal/frontal lobe T2/FLAIR hyperintensities with restricted diffusion, while autoimmune cases may have medial temporal or limbic involvement without enhancement, and metabolic/toxic etiologies appear normal.[52] Empiric acyclovir response supports HSV, as non-viral mimics show no improvement.[1] Brief reference to specific viral tests, such as multiplex PCR panels, helps confirm etiology when initial profiles suggest infection.[52] In 2025, distinguishing viral encephalitis from long COVID neurological syndromes has gained prominence, as post-acute sequelae of SARS-CoV-2 (PASC) can present with persistent encephalopathy, fatigue, and cognitive impairment months after infection.[54] Unlike acute viral encephalitis with prominent CSF pleocytosis and viral detection, long COVID-related parainfectious encephalopathy often shows normal or mildly abnormal CSF, elevated systemic cytokines (e.g., IL-6), and subtype-specific MRI findings like reversible splenial lesions, without direct neurotropic viral invasion; history of resolved COVID-19 and lack of progression aid differentiation.[54]| Condition | Key CSF Features | Typical MRI Findings | Other Discriminators |
|---|---|---|---|
| Viral Encephalitis | Lymphocytic pleocytosis, normal glucose, elevated protein; viral PCR+ | Focal T2/FLAIR hyperintensities (e.g., temporal lobes in HSV) | Response to acyclovir; fever, seizures |
| Bacterial Meningitis | Neutrophilic pleocytosis, low glucose, high protein; Gram stain+ | Meningeal enhancement | Rapid onset, nuchal rigidity |
| Autoimmune (e.g., anti-NMDAR) | Lymphocytic pleocytosis, oligoclonal bands; autoantibodies+ | Normal or medial temporal changes | Psychiatric features, no antiviral response |
| Metabolic Encephalopathy | Normal | Normal | Systemic derangement history, reversible |
| Long COVID Encephalopathy | Normal/mild pleocytosis; cytokines elevated | Subtype-specific (e.g., reversible splenial lesions) | Post-COVID history, chronic course |
