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Alligatoroidea
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| Alligatoroidea Temporal range:
| |
|---|---|
| Alligators (shown above) and caimans are living members of the superfamily Alligatoroidea. | |
| Scientific classification | |
| Kingdom: | Animalia |
| Phylum: | Chordata |
| Class: | Reptilia |
| Clade: | Archosauria |
| Order: | Crocodilia |
| Superfamily: | Alligatoroidea Gray, 1844 |
| Subgroups | |
Alligatoroidea is one of three superfamilies of crocodylians, the other two being Crocodyloidea and Gavialoidea. Alligatoroidea evolved in the Late Cretaceous period, and consists of the alligators and caimans, as well as extinct members more closely related to the alligators than the two other groups.
Evolution
[edit]
The superfamily Alligatoroidea is thought to have split from the crocodile-gharial lineage in the late Cretaceous, about 80 million years ago, but possibly as early as 100 million years ago based on molecular phylogenetics.[1][2][3] Leidyosuchus of Alberta is the earliest known genus. Although, a 2025 study considers it and Deinosuchus to be non-crocodylian eusuchians closely related to crocodylians.[4] Fossil alligatoroids have been found throughout Eurasia as land bridges across both the North Atlantic and the Bering Strait have connected North America to Eurasia during the Cretaceous, Paleogene, and Neogene periods. Alligators and caimans split in North America during the early Tertiary or late Cretaceous (about 53 million[2] to about 65 million years ago[1]) and the latter reached South America by the Paleogene, before the closure of the Isthmus of Panama during the Neogene period. The Chinese alligator split from the American alligator about 33 million years ago[2] and likely descended from a lineage that crossed the Bering land bridge during the Neogene. The modern American alligator is well represented in the fossil record of the Pleistocene.[5] The alligator's full mitochondrial genome was sequenced in the 1990s.[6] The full genome, published in 2014, suggests that the alligator evolved much more slowly than mammals and birds.[7]
Phylogeny
[edit]Cladistically, Alligatoroidea is defined as Alligator mississippiensis (the American alligator) and all crocodylians more closely related to A. mississippiensis than to either Crocodylus niloticus (the Nile crocodile) or Gavialis gangeticus (the gharial).[8] This is a stem-based definition for alligators,[9] and is more inclusive than the crown group Alligatoridae.[10] As a crown group, Alligatoridae only includes the last common ancestor of all extant (living) alligators, caimans, and their descendants (living or extinct), whereas Alligatoroidea, as a stem group, also includes more basal extinct alligator ancestors that are more closely related to living alligators than to crocodiles or gavialids. When considering only living taxa (neontology), this makes Alligatoroidea and Alligatoridae synonymous, and only Alligatoridae is used. Thus, Alligatoroidea is only used in the context of paleontology.
Traditionally, crocodiles and alligators were considered more closely related and grouped together in the clade Brevirostres, to the exclusion of the gharials. This classification was based on morphological studies primarily focused on analyzing skeletal traits of living and extinct fossil species.[11] However, recent molecular studies using DNA sequencing have rejected Brevirostres upon finding the crocodiles and gavialids to be more closely related than the alligators.[12][13][14][10][15] The new clade Longirostres was named by Harshman et al. in 2003.[12]
A 2018 tip dating study by Lee & Yates simultaneously using morphological, molecular (DNA sequencing), and stratigraphic (fossil age) data established the inter-relationships within Crocodilia,[10] which was expanded upon in 2021 by Hekkala et al. using paleogenomics by extracting DNA from the extinct Voay.[15]
The below cladogram shows the results of the latest study:
| Crocodylia |
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| (crown group) |
References
[edit]- ^ a b Oaks, J.R. (2011). "A time-calibrated species tree of Crocodylia reveals a recent radiation of the true crocodiles". Evolution. 65 (11): 3285–3297. doi:10.1111/j.1558-5646.2011.01373.x. PMID 22023592. S2CID 7254442.
- ^ a b c Pan, T.; Miao, J.-S.; Zhang, H.-B.; Yan, P.; Lee, P.-S.; Jiang, X.-Y.; Ouyang, J.-H.; Deng, Y.-P.; Zhang, B.-W.; Wu, X.-B. (2020). "Near-complete phylogeny of extant Crocodylia (Reptilia) using mitogenome-based data". Zoological Journal of the Linnean Society. 191 (4): 1075–1089. doi:10.1093/zoolinnean/zlaa074.
- ^ Rio, J. P. & Mannion, P. D. (2021). "Phylogenetic analysis of a new morphological dataset elucidates the evolutionary history of Crocodylia and resolves the long-standing gharial problem". PeerJ. 9 e12094. doi:10.7717/peerj.12094. PMC 8428266. PMID 34567843.
- ^ Walter, Jules D.; Massonne, Tobias; Paiva, Ana Laura S.; Martin, Jeremy E.; Delfino, Massimo; Rabi, Márton (2025-04-23). "Expanded phylogeny elucidates Deinosuchus relationships, crocodylian osmoregulation and body-size evolution". Communications Biology. 8 (1). doi:10.1038/s42003-025-07653-4. ISSN 2399-3642. PMC 12018936.
- ^ Brochu, Christopher A. (1999). "Phylogenetics, Taxonomy, and Historical Biogeography of Alligatoroidea". Society of Vertebrate Paleontology Memoir. 6: 9–100. doi:10.2307/3889340. JSTOR 3889340.
- ^ Janke, A.; Arnason, U. (1997). "The complete mitochondrial genome of Alligator mississippiensis and the separation between recent archosauria (birds and crocodiles)". Molecular Biology and Evolution. 14 (12): 1266–72. doi:10.1093/oxfordjournals.molbev.a025736. PMID 9402737.
- ^ Green RE, Braun EL, Armstrong J, Earl D, Nguyen N, Hickey G, Vandewege MW, St John JA, Capella-Gutiérrez S, Castoe TA, Kern C, Fujita MK, Opazo JC, Jurka J, Kojima KK, Caballero J, Hubley RM, Smit AF, Platt RN, Lavoie CA, Ramakodi MP, Finger JW, Suh A, Isberg SR, Miles L, Chong AY, Jaratlerdsiri W, Gongora J, Moran C, Iriarte A, McCormack J, Burgess SC, Edwards SV, Lyons E, Williams C, Breen M, Howard JT, Gresham CR, Peterson DG, Schmitz J, Pollock DD, Haussler D, Triplett EW, Zhang G, Irie N, Jarvis ED, Brochu CA, Schmidt CJ, McCarthy FM, Faircloth BC, Hoffmann FG, Glenn TC, Gabaldón T, Paten B, Ray DA (2014). "Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs". Science. 346 (6215) 1254449. doi:10.1126/science.1254449. PMC 4386873. PMID 25504731.
- ^ Brochu, Christopher A. (May 2003). "Phylogenetic approaches toward crocodylian history". Annual Review of Earth and Planetary Sciences. 31 (31): 360. Bibcode:2003AREPS..31..357B. doi:10.1146/annurev.earth.31.100901.141308.
- ^ Tobias Massonne; Davit Vasilyan; Márton Rabi; Madelaine Böhme (2019). "A new alligatoroid from the Eocene of Vietnam highlights an extinct Asian clade independent from extant Alligator sinensis". PeerJ. 7 e7562. doi:10.7717/peerj.7562. PMC 6839522. PMID 31720094.
- ^ a b c Michael S. Y. Lee; Adam M. Yates (27 June 2018). "Tip-dating and homoplasy: reconciling the shallow molecular divergences of modern gharials with their long fossil". Proceedings of the Royal Society B. 285 (1881). doi:10.1098/rspb.2018.1071. PMC 6030529. PMID 30051855.
- ^ Holliday, Casey M.; Gardner, Nicholas M. (2012). Farke, Andrew A (ed.). "A new eusuchian crocodyliform with novel cranial integument and its significance for the origin and evolution of Crocodylia". PLOS ONE. 7 (1) e30471. Bibcode:2012PLoSO...730471H. doi:10.1371/journal.pone.0030471. PMC 3269432. PMID 22303441.
- ^ a b Harshman, J.; Huddleston, C. J.; Bollback, J. P.; Parsons, T. J.; Braun, M. J. (2003). "True and false gharials: A nuclear gene phylogeny of crocodylia". Systematic Biology. 52 (3): 386–402. doi:10.1080/10635150309323. PMID 12775527.
- ^ Gatesy, J.; Amato, G. (2008). "The rapid accumulation of consistent molecular support for intergeneric crocodylian relationships". Molecular Phylogenetics and Evolution. 48 (3): 1232–1237. doi:10.1016/j.ympev.2008.02.009. PMID 18372192.
- ^ Erickson, G. M.; Gignac, P. M.; Steppan, S. J.; Lappin, A. K.; Vliet, K. A.; Brueggen, J. A.; Inouye, B. D.; Kledzik, D.; Webb, G. J. W. (2012). Claessens, Leon (ed.). "Insights into the ecology and evolutionary success of crocodilians revealed through bite-force and tooth-pressure experimentation". PLOS ONE. 7 (3) e31781. Bibcode:2012PLoSO...731781E. doi:10.1371/journal.pone.0031781. PMC 3303775. PMID 22431965.
- ^ a b Hekkala, E.; Gatesy, J.; Narechania, A.; Meredith, R.; Russello, M.; Aardema, M. L.; Jensen, E.; Montanari, S.; Brochu, C.; Norell, M.; Amato, G. (2021-04-27). "Paleogenomics illuminates the evolutionary history of the extinct Holocene "horned" crocodile of Madagascar, Voay robustus". Communications Biology. 4 (1): 505. doi:10.1038/s42003-021-02017-0. ISSN 2399-3642. PMC 8079395. PMID 33907305.
Alligatoroidea
View on GrokipediaTaxonomy and Classification
Definition and Scope
Alligatoroidea is a stem-based clade within the order Crocodilia, defined as Alligator mississippiensis (the American alligator) and all crocodylians more closely related to it than to Crocodylus niloticus (the Nile crocodile) or Gavialis gangeticus (the gharial).[6] This phylogenetic definition, established through cladistic analysis of morphological characters, emphasizes evolutionary relationships rather than shared derived traits alone, encompassing a broad range of taxa from the Late Cretaceous onward. The clade's boundaries are thus determined by proximity to the American alligator in the crocodylian tree, excluding longirostrine forms like gavialoids while including short-snouted and intermediate morphologies.[7] The superfamily Alligatoroidea was originally coined by John Edward Gray in 1844 in his catalog of reptilian specimens at the British Museum, where he grouped alligators and related forms based on early anatomical observations. This naming predated modern cladistics and initially aligned with traditional classifications, but subsequent phylogenetic work has refined it to reject the obsolete Brevirostres grouping, which erroneously united alligatoroids and crocodyloids to the exclusion of gavialoids based on rostral length. Instead, molecular and morphological evidence supports Alligatoroidea as a distinct lineage diverging early within Crocodylia.[8] Within Crocodilia, Alligatoroidea occupies a basal position as the sister group to the clade comprising Crocodyloidea and Gavialoidea, collectively forming the extant diversity of the order. This arrangement places Alligatoroidea firmly within the suborder Eusuchia, characterized by advanced anatomical features such as a fully thecodont dentition and a eusuchian palate, which originated in the Late Cretaceous.[7] The superfamily's scope thus includes the crown-group family Alligatoridae—encompassing living alligators (genus Alligator) and caimans (genera Caiman, Melanosuchus, and Paleosuchus)—along with extinct basal alligatoroids such as those in Diplocynodontinae and the more inclusive Globidonta clade, which bridges early diverging forms and modern taxa. This broad inclusion highlights Alligatoroidea's role in understanding crocodylian diversification, with fossils revealing a once-global distribution now restricted to the Americas and eastern Asia for living members.[9]Living Genera and Species
The superfamily Alligatoroidea is represented today solely by the family Alligatoridae, which includes eight extant species across two subfamilies: Alligatorinae (two species) and Caimaninae (six species in three genera).[3] These freshwater crocodilians are primarily distributed in the Americas, with one species restricted to East Asia. Alligatoridae species share broad snouts and U-shaped jaw profiles but differ in key cranial and dermal features between subfamilies.Alligatorinae
The subfamily Alligatorinae comprises the single genus Alligator, with two species characterized by a complete bony nasal septum formed by the nasal bones that divides the external nares, as well as non-overlapping dorsal scutes.[10]- Alligator mississippiensis (American alligator): Native to freshwater wetlands of the southeastern United States, this species is abundant and listed as Least Concern by the IUCN due to successful conservation efforts following historical overhunting.[11]
- Alligator sinensis (Chinese alligator): Confined to the Yangtze River basin in eastern China, it inhabits subtropical wetlands and is critically endangered, with fewer than 200 individuals remaining in the wild primarily due to habitat loss and persecution.[12]
Caimaninae
The subfamily Caimaninae includes three genera and six species, distinguished from Alligatorinae by the absence of a bony nasal septum and the presence of overlapping dorsal scutes.[10] These smaller-bodied caimans are predominantly Neotropical, occupying rivers, marshes, and flooded forests across Central and South America. The following table summarizes the living species in Caimaninae:| Genus | Species | Common Name | Key Notes |
|---|---|---|---|
| Paleosuchus | Paleosuchus palpebrosus | Cuvier's dwarf caiman | Smallest crocodilian; nocturnal; Least Concern.[11] |
| Paleosuchus | Paleosuchus trigonatus | Smooth-fronted caiman | Forest-dwelling; Least Concern.[11] |
| Caiman | Caiman crocodilus | Spectacled caiman | Widespread; highly abundant; Least Concern.[11] |
| Caiman | Caiman yacare | Yacare caiman | Floodplain specialist; Least Concern.[11] |
| Caiman | Caiman latirostris | Broad-snouted caiman | Adapted for burrowing; Least Concern.[11] |
| Melanosuchus | Melanosuchus niger | Black caiman | Largest Neotropical species; apex predator; Least Concern following population recovery.[11] |