Citrus

Citrus is a genus of flowering trees and shrubs in the family Rutaceae. Plants in the genus produce citrus fruits, such as citrons, mandarins, and pomelos. Many important citrus crops have been developed through extensive hybridization, including oranges, lemons, grapefruits, and limes, all of which have many cultivars.

Citrus is native to South Asia, East Asia, Southeast Asia, Melanesia, and Australia. Indigenous people in these areas have used and domesticated various species since ancient times. Its cultivation first spread into Micronesia and Polynesia through the Austronesian expansion (c. 3000–1500 BCE). Later, it was spread to the Middle East and the Mediterranean (c. 1200 BCE) via the incense trade route, and then from Europe to the Americas.

Renowned for their highly fragrant aromas and complex flavor, citrus are among the most popular fruits in cultivation. With a propensity to hybridize between species, making their taxonomy complicated, there are numerous varieties encompassing a wide range of appearance and fruit flavors.

The large citrus fruit of today evolved originally from small, edible berries over millions of years. Citrus species began to diverge from a common ancestor about 15 million years ago, at about the same time that Severinia (such as the Chinese box orange) diverged from the same ancestor. About 7 million years ago, the ancestors of Citrus split into the main genus, Citrus, and the Poncirus group (such as the trifoliate orange), which some taxonomies consider a separate genus and others include in Citrus Poncirus is closely enough related that it can still be hybridized with all other citrus and used as rootstock. These estimates are made using genetic mapping of plant chloroplasts. A DNA study published in Nature in 2018 concludes that the genus Citrus evolved in the foothills of the Himalayas, in the area of Assam (India), western Yunnan (China), and northern Myanmar.

The three ancestral species in the genus Citrus associated with modern Citrus cultivars are the mandarin orange, pomelo, and citron. Almost all of the common commercially important citrus fruits (sweet oranges, lemons, grapefruit, limes, and so on) are hybrids between these three species, their main progenies, and other wild Citrus species within the last few thousand years.

Citrus plants are native to subtropical and tropical regions of Asia, Island Southeast Asia, Near Oceania, and northeastern and central Australia. Domestication of citrus species involved much hybridization and introgression, leaving much uncertainty about when and where domestication first happened. A genomic, phylogenic, and biogeographical analysis by Wu et al. (2018) has shown that the center of origin of the genus Citrus is likely the southeast foothills of the Himalayas, in a region stretching from eastern Assam, northern Myanmar, to western Yunnan. It diverged from a common ancestor with Poncirus trifoliata. A change in climate conditions during the Late Miocene (11.63 to 5.33 mya) resulted in a sudden speciation event. The species resulting from this event include the citrons (Citrus medica) of South Asia; the pomelos (C. maxima) of Mainland Southeast Asia; the mandarins (C. reticulata), kumquats (C. japonica), mangshanyegan (C. mangshanensis), and ichang papedas (C. cavaleriei) of southeastern China; the kaffir limes (C. hystrix) of Island Southeast Asia; and the biasong and samuyao (C. micrantha) of the Philippines.

This was followed by the spread of citrus species into Taiwan and Japan in the Early Pliocene (5.33 to 3.6 mya), resulting in the tachibana orange (C. tachibana); and beyond the Wallace Line into Papua New Guinea and Australia during the Early Pleistocene (2.5 million to 800,000 years ago), where further speciation events created the Australian limes.

A fossil leaf from the Pliocene of Valdarno, Italy is described as †Citrus meletensis. In China, fossil leaf specimens of †Citrus linczangensis have been collected from late Miocene coal-bearing strata of the Bangmai Formation in Yunnan province. C. linczangensis resembles C. meletensis in having an intramarginal vein, an entire margin, and an articulated and distinctly winged petiole.