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International Code of Nomenclature of Prokaryotes
International Code of Nomenclature of Prokaryotes
International Code of Nomenclature of Prokaryotes
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The International Code of Nomenclature of Prokaryotes (ICNP) or Prokaryotic Code, formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC), governs the scientific names for Bacteria and Archaea.[1][2] It denotes the rules for naming taxa of bacteria, according to their relative rank. As such it is one of the nomenclature codes of biology.

Originally the International Code of Botanical Nomenclature dealt with bacteria, and this kept references to bacteria until these were eliminated at the 1975 International Botanical Congress. An early Code for the nomenclature of bacteria was approved at the 4th International Congress for Microbiology in 1947, but was later discarded.

The latest version to be printed in book form is the 1990 Revision,[3] but the book does not represent the current rules. The 2008 and 2022 Revisions have been published in the International Journal of Systematic and Evolutionary Microbiology (IJSEM).[2] Rules are maintained by the International Committee on Systematics of Prokaryotes (ICSP; formerly the International Committee on Systematic Bacteriology, ICSB).

The baseline for bacterial names is the Approved Lists[4] with a starting point of 1980. New bacterial names are reviewed by the ICSP as being in conformity with the Rules of Nomenclature and published in the IJSEM.

Cyanobacteria

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Since 1975, most bacteria were covered under the bacteriological code. However, cyanobacteria were still covered by the botanical code. Starting in 1999, cyanobacteria were covered by both the botanical and bacteriological codes. This situation has caused nomenclatural problems for the cyanobacteria.[5][6] By 2020, there were three proposals for how to resolve the situation:

  1. Exclude cyanobacteria from the bacteriological code.[7]
  2. Apply the bacteriological code to all cyanobacteria.[8]
  3. Treat valid publication under the botanical code as valid publication under the bacteriological code.[9]

In 2021, the ICSP held a formal vote on the three proposals and the third option was chosen.[10]

Type strain

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Main article: Type (biology)

Since 2001, when a new bacterial or archaeal species is described, a type strain must be designated.[11] The type strain is a living culture to which the scientific name of that organism is formally attached. For a new species name to be validly published, the type strain must be deposited in a public culture collection in at least two different countries.[12] Before 2001, a species could also be typified using a description, a preserved specimen, or an illustration.[11] There is a single type strain for each prokaryotic species, but different culture collections may designate a unique name for the same strain. For example, the type strain of E. coli (originally strain U5/41) is called ATCC 11775 by the American Type Culture Collection, DSM 30083 by the German Collection of Microorganisms and Cell Cultures, JCM 1649 by the Japan Collection of Microorganisms, and LMG 2092 by the Belgian Coordinated Collections of Microorganisms.[13][14]

When a prokaryotic species cannot be cultivated in the laboratory (and therefore cannot be deposited in a culture collection), it may be given a provisional Candidatus name, but is not considered validly published.[15] Since 2024, these names can be "pro-validly published" and become "pro-legitimate" and "pro-correct". This requires the name to meet most existing requirements for valid publication (and analogously for legitimacy and correctness), except the culture deposition in Rule 30 can be replaced by a living culture not meeting the requirements of Rule 30, a preserved specimen, a sequenced genome deposited on the INSDC, or a single-gene sequence deposited to the INSDC. Pro-legitimate Candidatus names compete with each other for priority, but do not compete with "real" legitimate names.[16]

Before the pro-valid publication mechanism, the validation of Candidatus names fell to the Code of Nomenclature of Prokaryotes Described from Sequence Data (SeqCode) which is published by the International Society for Microbial Ecology, an organization separate from the ICSP, in 2022.[17]

Other notable differences from the Botanical Code

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Notable differences in rules:

  • Hyphenation is not allowed. Previously hyphenated names and new compounds are to be simply joined.[18]: Rule 12a 
  • Diacritics are not allowed. There are fixed two-letter replacements for some letters with diacritics.[18]: Rule 64  There is no clarifying carve-out for diaeresis (ë) like in Rule 60.7 of the Shenzhen Code.[19]

Notable differences in recommended practice:

  • Scientific names are recommended to be differentiated "by a different type face, e.g., italic, or by some other device". Italicization is not mandatory.[18]: 4.A.(3) 
    • There are no rank-specific rules for italicization in the ICNP. While many publishers choose to italicize genera and species only, the affiliated IJSEM and the ICNP text itself italicize all scientific names (with the exception of Candidatus-specific formatting).
    • Latin words or abbreviations that follow an italicized scientific name should not be italicized. They may be laid out in roman (regular) font, or in bold if differentiation is desired.[18]: Rule 33a:Note 2 
  • The author citation term ex is to be used in parentheses, in the form "Taxon (ex Earlier) Later". Subsequent revisions should be cited in the form "Taxon (Later ex Earlier) Subsequent". non should also be parenthesized, like in "Achromobacter Yabuuchi and Yano 1981 (non Achromobacter Bergey et al. 1923)".[18]: 4.B.(3) 

Versions

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  • Buchanan, R. E., and Ralph St. John-Brooks. (1947, June) (Editors). Proposed Bacteriological Code of Nomenclature. Developed from proposals approved by International Committee on Bacteriological Nomenclature at the Meeting of the Third International Congress for Microbiology. Publication authorized in Plenary Session, pp. 61. Iowa State College Press, Ames, Iowa. U.S.A. Hathi Trust.
  • Buchanan R. E., St , John-Brooks R., Breed R. S. (1948). "International bacteriological code of nomenclature". Journal of Bacteriology. 55 (3): 287–306. doi:10.1128/jb.55.3.287-306.1948. PMC 518444. PMID 16561459.{{cite journal}}: CS1 maint: multiple names: authors list (link) Reprinted 1949, Journal of General Microbiology 3, 444–462.
  • International Committee on Bacteriological Nomenclature. (1958, June). International code of nomenclature of bacteria and viruses. Ames, Iowa State College Press. BHL.
  • Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R. & Clark, W.A. (1975). International Code of Nomenclature of Bacteria. 1975 Revision. American Society of Microbiology, Washington, D.C.
  • Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R. & Clark, W.A. (1992). International Code of Nomenclature of Bacteria. Bacteriological Code. 1990 Revision. American Society for Microbiology, Washington, D.C. link.
  • Parker, C.T., Tindall, B.J. & Garrity, G.M., eds. (2019). International Code of Nomenclature of Prokaryotes. Prokaryotic Code (2008 Revision). International Journal of Systematic and Evolutionary Microbiology 69(1A): S1–S111. doi: 10.1099/ijsem.0.000778
  • Oren, Aharon; Arahal, David R.; Göker, Markus; Moore, Edward R. B.; Rossello-Mora, Ramon; Sutcliffe, Iain C. (1 May 2023). "International Code of Nomenclature of Prokaryotes. Prokaryotic Code (2022 Revision)". International Journal of Systematic and Evolutionary Microbiology. 73 (5a). doi:10.1099/ijsem.0.005585. hdl:10261/338243. PMID 37219928.

See also

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References

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Revisions and contributorsEdit on WikipediaRead on Wikipedia

International Code of Nomenclature of Prokaryotes

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The International Code of Nomenclature of Prokaryotes (ICNP) is a set of internationally agreed-upon rules and recommendations that govern the scientific naming of prokaryotic organisms, encompassing and , to promote stability, universality, and precision in taxonomic . Adopted by the International Committee on Systematics of Prokaryotes (ICSP), the ICNP ensures that names are formed in Latin or latinized forms, based on nomenclatural types such as type strains, and validated through publication in the International Journal of Systematic and Evolutionary Microbiology (IJSEM). Unlike the International Code of Nomenclature for algae, fungi, and plants or the , which apply to eukaryotes, the ICNP specifically addresses prokaryotes and emphasizes viable cultures and phenotypic characteristics for taxonomy. Originating from efforts in the 1930s, the code's first edition was approved in 1958 as the International Code of Nomenclature of Bacteria and Viruses, with subsequent revisions in 1975, 1990, and 2008 (published in 2019) to incorporate and reflect advances in . The 2022 revision, published in 2023, introduced key updates such as formal recognition of the rank, clarification of effective publication requirements, and integration of the ICSP's statutes, following 45 emendation proposals and . A 2025 revision is currently in preparation, with public discussion ongoing since January 2025 to address further refinements in response to evolving practices like genomic . The ICNP is structured around five core principles—priority, stability, typification, latinization, and the single correct name—followed by detailed rules on valid , legitimate names, and authorship, as well as recommendations for and . It applies retroactively from 1 for new names and taxa, maintaining lists of conserved and rejected names to resolve nomenclatural conflicts and preserve scientific continuity. Overseen by the ICSP under the International Union of Microbiological Societies (IUMS), the code functions as a "living document," subject to periodic emendations through proposals, ballots, and IJSEM , ensuring adaptability to microbiological while upholding rigorous standards.

History and Development

Origins in Botanical Nomenclature

In the late 19th and early 20th centuries, were classified alongside and fungi due to their perceived plant-like characteristics, leading bacteriologists to apply the International Code of Botanical Nomenclature (ICBN), originally established in 1867 by Alphonse de Candolle. This botanical framework, which emphasized priority based on Linnaean principles from 1753, proved inadequate for prokaryotes, as it was designed primarily for macroscopic and did not address the unique challenges of microbial identification and description. Despite these limitations, the ICBN served as the de facto standard for bacterial naming until efforts emerged to develop specialized rules. A pivotal early effort in standardizing bacterial nomenclature came from David Hendricks Bergey, an American bacteriologist who chaired the editorial board appointed by the Society of American Bacteriologists. In 1923, Bergey oversaw the publication of the first edition of Bergey's Manual of Determinative Bacteriology, which provided a practical guide for identifying bacterial species based on phenotypic traits and aimed to promote consistent classification and practices. Subsequent editions, published in 1925 and 1930 under Bergey's leadership, further reinforced these efforts, establishing the manual as an influential reference that bridged descriptive taxonomy with nomenclatural stability, even as it operated within the botanical code's constraints. In 1936, Bergey founded the Bergey's Manual Trust to ensure the work's ongoing development and independence. The push for a distinct bacteriological code gained momentum at international congresses. At the Fourth International Congress for Microbiology in Copenhagen in 1947, the Judicial Commission of the International Committee on Bacteriological Nomenclature proposed a dedicated , which was approved and published in 1948, marking the first formal attempt to diverge from strict botanical rules while retaining some alignments, such as the 1753 starting date. However, this 1947 code was not widely accepted and was soon superseded due to evolving needs in . The decisive separation occurred at the First International Congress for Bacteriology in in 1973, where delegates approved a revised International of Nomenclature of Bacteria in 1975, introducing concepts like valid publication and approved lists of names to fully detach from the ICBN and establish independent principles for prokaryotic . This 1975 code laid the groundwork for the modern International Code of Nomenclature of Prokaryotes (ICNP), formally adopted in 1990 to encompass both and .

Evolution Through Revisions

The 1976 revision of the International Code of Nomenclature of Bacteria was published as a standalone document, marking the initial formalization of rules specifically for bacterial nomenclature separate from broader botanical codes. This edition, based on the 1975 revision approved by the International Committee on Systematic Bacteriology, established core principles such as priority and valid publication while retaining influences from earlier botanical traditions. A pivotal milestone occurred in 1980 with the introduction of the Approved Lists of Bacterial Names, which defined a new nomenclatural starting point effective January 1, 1980, by validating only names meeting contemporary standards and nullifying prior ones lacking sufficient description. This reform addressed taxonomic instability from accumulated names without type material, requiring subsequent names to appear in the International Journal of Systematic Bacteriology (now the International Journal of Systematic and Evolutionary Microbiology) for validation. The 1990 revision, published as a book in 1992, expanded the code's scope to encompass all prokaryotes, including (then termed archaebacteria), and refined rules for name formation and priority while maintaining the title International Code of Nomenclature of Bacteria. In 2001, an amendment to mandated the deposition of viable type strains in at least two recognized culture collections in different countries for valid publication of new and names, effective from January 1, 2001, to ensure accessibility and reproducibility. The 2008 revision, approved by the International Committee on Systematics of Prokaryotes (ICSP) in and published in 2019, renamed the code the International Code of Nomenclature of Prokaryotes (ICNP) to reflect its prokaryotic breadth and introduced orthographic updates in Appendix 9, along with advisory notes clarifying applications of rules like those for epithets and hybrid names. Further evolution came in 2021 through ICSP decisions integrated into the 2022 revision, adding the rank to the code's (Rule 5b) with the "-ota" for names and harmonizing for by recognizing validly published names under the International Code of Nomenclature for , fungi, and plants (Rule 18a). Revisions to the ICNP follow a structured overseen by the ICSP's Judicial Commission and , beginning with proposals from subcommittees or experts on rule emendations, followed by —such as the online discussion of 45 proposals from 2008 to 2020 held from July to December 2021—and culminating in ballots by ICSP members, as seen in the April–June 2022 vote approving the latest edition. This iterative approach ensures adaptability to advances in , such as genomic data integration, while preserving nomenclatural stability. A 2025 revision is in preparation, with a draft incorporating ratified emendations published in January 2025 and ongoing to address issues such as genomic .

Governance by the International Committee on Systematics of Prokaryotes

The International Committee on Systematics of Prokaryotes (ICSP) traces its origins to the First International Congress of Microbiology held in in 1930, where a Commission on Nomenclature and Taxonomy was established to develop a dedicated code for bacterial nomenclature, separate from the International Code of Botanical Nomenclature. This commission, chaired by E. Pribram with R. E. Buchanan as a key member, evolved through subsequent congresses; at the 1936 London congress, an American subcommittee was formed to draft a tentative code, marking the formal inception of what became the International Committee for Bacteriological Nomenclature. By 1939, at the New York congress, the committee had solidified its structure and presented a revised draft, positioning it as the taxonomy subcommittee under the emerging International Association of Microbiological Societies (later the International Union of Microbiological Societies, IUMS). Over time, it was renamed the International Committee on Systematic Bacteriology in 1970 and the ICSP in 1999 to reflect the inclusion of . The ICSP serves as the primary governing body for prokaryotic nomenclature, with core responsibilities including approving revisions to the International Code of Nomenclature of Prokaryotes (ICNP), issuing judicial opinions via its Judicial Commission to interpret code provisions, maintaining official lists of conserved and rejected names to ensure nomenclatural stability, and emending the code through formal ballots among its members. These roles promote uniformity in naming prokaryotes ( and ) while adapting to scientific advancements, such as incorporating molecular data without undermining priority principles. The committee operates under the Bacteriology and Applied Microbiology Division of the IUMS, representing diverse microbiological disciplines globally. Organizationally, the ICSP comprises approximately 12-15 members, including full members appointed by IUMS-affiliated national microbiological societies (with larger societies allowed up to three delegates), co-opted experts, and life members who retain voting rights. It is led by an Executive Board consisting of a , vice-chair, executive secretary, , secretary for subcommittees, and two members-at-large, elected for four-year terms. Specialized subcommittees support its work, such as taxonomic subcommittees for specific prokaryotic groups (e.g., and related ) and groups addressing issues like , the formation of names, and provisions for Candidatus designations for uncultured taxa. The ICSP maintains a close partnership with the International Journal of Systematic and Evolutionary Microbiology (IJSEM), published by the on behalf of the IUMS, which handles the validation of new names through periodic Validation Lists and ensures compliance with code requirements like and type strain designations. Key operational statutes were updated in 2019 to enhance efficiency, notably shifting primary authority for proposing and overseeing emendations to the ICNP from the full ICSP to a dedicated (comprising the , Judicial Commission officers, and ICSP representatives), while retaining final approval via ICSP ballots; this change separated legislative and judicial functions more clearly. The statutes also formalized and discussions to accommodate global participation. Annual plenary meetings are typically held in conjunction with IUMS international congresses, fostering collaboration and decision-making on pressing issues. Illustrative of its governance actions, the ICSP approved in 2021 the formal recognition of the rank for prokaryotes, mandating the suffix "-ota" (e.g., Proteobacteria becoming Pseudomonadota) to standardize higher-level amid genomic era expansions. In 2020, the ICSP rejected proposals to permit gene sequences (e.g., 16S rRNA) as nomenclatural type material, upholding the requirement for physical type strains or descriptions to maintain verifiable stability. These decisions, balloted among members, exemplify the ICSP's role in balancing innovation with nomenclatural rigor.

Scope and Principles

Coverage of Prokaryotic Taxa

The International Code of Nomenclature of Prokaryotes (ICNP) applies exclusively to prokaryotic organisms, encompassing the domains Bacteria and Archaea, and regulates the naming of all taxonomic ranks from phylum to subspecies. The rank of phylum was formally incorporated into the ICNP in 2021 through emendations to Rules 5b, 8, 15, and 22, allowing for standardized naming at this higher level with the suffix "-ota" for class-level equivalents within phyla. This scope ensures consistent nomenclatural practices for prokaryotes while excluding viruses, eukaryotes, and fossilized remains, which fall under separate codes such as the International Code of Nomenclature for algae, fungi, and plants (ICN) or the International Code of Zoological Nomenclature (ICZN). Importantly, the ICNP governs only nomenclature—the assignment and validity of names—and does not regulate taxonomic classification, phylogenetic relationships, or the arrangement of taxa into groups. In 2023, proposals were advanced and subsequently approved to further expand the ICNP's coverage by including the ranks of kingdom and domain above phylum, aimed at enhancing nomenclatural stability through emendations to Principle 8, Rules 5b, 8, 15, 33a, and Appendix 7. These additions address gaps in higher-rank nomenclature, enabling formal naming of the two primary prokaryotic domains (Bacteria and Archaea) and proposed kingdoms within them, such as seven kingdoms validated in 2024 publications. The ICNP's temporal scope is limited to names validly published from January 1, 1980, onward, with retroactive application facilitated by the Approved Lists of Bacterial Names compiled in 1980; names proposed before this date are considered valid only if included on those lists, ensuring a clean slate for modern prokaryotic nomenclature. As of November 2025, over 26,850 species names of prokaryotes have been validly published under the ICNP, reflecting the vast and growing diversity of named taxa across the domains Bacteria and Archaea. Cyanobacteria, as prokaryotes, fall under this coverage but receive special handling due to their historical dual nomenclature under both the ICNP and the ICN.

Core Nomenclatural Principles

The core nomenclatural principles of the (ICNP) establish the foundational guidelines for naming prokaryotic taxa, emphasizing stability, clarity, and international applicability in scientific communication. Principle 1 underscores the primary objectives of nomenclature: to promote stability in names, avoid or reject those that may cause error or confusion, and prevent the unnecessary creation of duplicate or superfluous names, while ensuring that the Code does not impede freedom in taxonomic research or opinions. This principle serves as the bedrock for maintaining reliable and unambiguous nomenclature across global scientific endeavors. Central to the ICNP is Principle 5, which dictates that the application and precise meaning of names for prokaryotic taxa are determined by nomenclatural types, such as type strains for species or type species for genera, providing a fixed reference point for identification and classification. For instance, the type strain of Escherichia coli anchors the species name to a specific, preserved isolate, ensuring consistency regardless of evolving taxonomic insights. Complementing this, Principle 6 defines the correct name of a taxon as the one that fulfills criteria of valid publication, legitimacy (adherence to formation rules), and priority, with priority established from the baseline date of January 1, 1980, as set by the Approved Lists of Bacterial Names. This temporal starting point resets earlier nomenclature to foster stability post-1980. To enhance interoperability with broader biological nomenclature, Principle 2 requires that, when proposing names for genera or higher ranks, due consideration be given to avoiding conflicts with names already regulated under the or the International Code of Nomenclature for algae, fungi, and plants, promoting consistency across disciplines where feasible. Similarly, Principle 3 mandates that all names be in Latin or latinized form, treated grammatically as Latin, including appropriate agreement between generic names and specific epithets, to standardize linguistic usage and facilitate universal comprehension. For example, the specific epithet in agrees in with the neuter generic name . Overarching these is the principle of universality, which ensures the ICNP applies worldwide to all prokaryotes without constraining individual taxonomic judgments, allowing scientists to propose revisions based on new evidence while upholding nomenclatural stability. This global scope, rooted in the Code's structure, supports collaborative research in by providing a neutral framework for name usage.

Rules of Nomenclature

Priority and Valid Publication

In the International Code of Nomenclature of Prokaryotes (ICNP), the principle of priority ensures stability in by establishing that the correct name for a is the earliest validly published one that complies with the rules. Rule 23a specifies that for each from to order, only one legitimate name is accepted, determined by the date of its valid ; for names, which consist of a name and specific , priority applies independently to each component. This means that when a is transferred to a new , the specific retains its priority regardless of the name's history. The principle promotes uniformity but allows exceptions through decisions by the Judicial Commission of the International Committee on Systematics of Prokaryotes (ICSP). Priority became effective from January 1, 1980, marking the starting point for modern prokaryotic nomenclature under Rule 24a. Names validly published before this date were included in the Approved Lists of Bacterial Names and Approved Lists of Viral Names, published in the International Journal of Systematic Bacteriology (now the International Journal of Systematic and Evolutionary Microbiology, or IJSEM) on that date; these lists confer valid publication status to the included names, along with their associated types and descriptions. Names absent from the Approved Lists, even if previously described, lack standing in nomenclature unless subsequently validated. This cutoff addressed historical ambiguities by resetting priority, ensuring that only names meeting contemporary standards persist. Valid publication is a prerequisite for priority and requires both effective publication and explicit validation in the IJSEM, as outlined in Rule 27. Effective entails a detailed description or reference to one, including , diagnostic characteristics, and designation of a nomenclatural type, typically appearing in a peer-reviewed journal. For validation, the name must then be listed in the IJSEM's Notification of New Taxa or a Validation List, confirming compliance with ICNP rules. Since January 1, 2001, an additional requirement under mandates that type strains for new or be deposited in at least two publicly accessible service culture collections in different countries, with accession numbers provided in the protologue to ensure availability for verification and study. Failure to include such details results in the name being effectively published but not validly published, preventing it from gaining priority. Exceptions to strict priority are provided by Rule 56b, which allows for the conservation of a later name (nomen conservandum) over an earlier one if it serves nomenclatural stability or avoids disadvantageous changes. Such decisions are made exclusively by the Judicial Commission and result in the overriding earlier synonyms or homonyms, with listings maintained in Appendix 4 of the ICNP. For example, if two synonymous names compete, the conserved one takes precedence regardless of publication date. This mechanism has been invoked in cases where earlier names cause or lack sufficient support, ensuring practical utility in prokaryotic . Post-2001, numerous proposed names have been denied valid publication status due to non-compliance with type strain deposition requirements, as tracked in the IJSEM's lists of effectively but not validly published names. For instance, proposals lacking evidence of dual deposits in international collections, such as those in the DSMZ () and ATCC (), are routinely excluded from validation lists until rectified. This enforcement underscores the ICNP's emphasis on accessibility of types, with the Judicial Commission occasionally issuing opinions to reject or conserve names based on such deficiencies, as seen in cases involving inadequate strain availability.

Nomenclatural Types and Designation

In the International Code of Nomenclature of Prokaryotes (ICNP), nomenclatural types serve as the permanent reference points that anchor the application of names to specific taxa, ensuring stability and objectivity in prokaryotic . The principles of the ICNP state that names are determined by nomenclatural types ( 5), with priority based on the date of valid (General Consideration 6), ensuring that types define the limits of and resolve nomenclatural disputes. This principle underscores that the name of a is permanently linked to its type, regardless of taxonomic reclassifications based on new phylogenetic data. Rule 15 mandates that every name of a , from to higher ranks, must be based on a single specified type, which is fixed and cannot be changed except under exceptional circumstances defined by the code. For and , the type is typically a specific strain (type strain), while for genera it is a type , and for families, orders, classes, and phyla, it is a type or equivalent lower-rank . This hierarchical structure ensures consistency across taxonomic ranks, as detailed in Rules 16–22. The designation of types for species and subspecies follows Rule 18, which prioritizes the —a specific strain explicitly designated by the original in the publication establishing the name. If no holotype was designated, a lectotype may be selected from the original material by subsequent authors. In cases where the original type is lost, contaminated, or no longer viable, a neotype strain can be proposed and established after a two-year period without objection from the . For instance, the neotype strain for Leptospira interrogans was designated as ATCC 43642, replacing the prior strain ATCC 23581 due to authenticity concerns, as approved by Opinion 91 of the Judicial Commission. Similarly, ATCC 12472 serves as the neotype for . Since January 1, 2001, requires that type strains for new species and subspecies must be deposited in at least two recognized culture collections in two different countries to ensure long-term accessibility and viability. These collections must be publicly accessible, and the strains should represent the properties of the as described. Exceptions to this dual-deposition requirement may be granted by the International Committee on Systematics of Prokaryotes (ICSP) for organisms in higher risk groups (e.g., 3 pathogens) or those difficult to maintain, but deposition remains mandatory for valid publication. An example is the type strain of halophila, deposited as DSM 3051 in multiple international collections. Valid publication of a name further necessitates the explicit designation and description of the type strain. For higher taxa, Rule 22 specifies that the type is the lowest-ranked subordinate taxon; thus, a phylum's type is a genus, a class's type is an order, an order's type is a , and a family's type is a genus. For example, the Enterobacteriaceae has Escherichia as its , with Escherichia coli as the type species. In 2020, the ICSP rejected a proposal to amend the ICNP to allow gene sequences or genomic data as nomenclatural types, reaffirming the requirement for physical type strains to maintain nomenclatural stability. For rare cases involving non-culturable prokaryotes, the code permits provisional designations based on detailed descriptions or illustrations prior to 2001, but post-2001 names require culturable types for validity, with Candidatus nomenclature serving as a non-priority provisional system.

Orthography and Name Formation

The orthography of prokaryotic names under the International Code of Nomenclature of Prokaryotes (ICNP) ensures uniformity and precision in scientific communication by mandating the use of Latin or latinized forms for all taxon names, as outlined in Chapter 6 and Rules 57–65. These rules require that names be constructed according to classical Latin and Greek grammatical principles, with original spellings preserved except for typographical or orthographic errors, which may be corrected using "corrig." to indicate the change without affecting nomenclatural priority. For instance, inadvertent misspellings like Salmonella gamaba (intended as gambaga) are treated as nomina perplexa and may be referred to the Judicial Commission for resolution if they cause confusion. Names must avoid hyphens and diacritic marks, with symbols like ä transliterated to ae (e.g., Trüper becomes Truper), as specified in Rule 64, to maintain compatibility with standard printing and digital indexing. Genus names are typically formed by latinizing personal or institutional names, geographical locations, or descriptive terms; for example, derives from the surname Escherich, adapted to a feminine ending in -ia. Specific epithets, which describe characteristics or origins, must be lowercase and agree in gender (masculine, feminine, or neuter) with the name, ensuring grammatical harmony as per Rule 60. Adjectives used as epithets thus end in -us (masculine), -a (feminine), or -um (neuter), such as aureus in . Gender assignment follows Rule 65, where or Greek words retain their original , modern compound names take the of their final component, and arbitrarily formed names adopt the specified by the author. Specific endings guide this process: for instance, Greek-derived -oides is treated as neuter (e.g., ), while -opsis is feminine (e.g., bacteropsis), reflecting updates in the 2022 revision published in 2023 that align with . Personal names forming epithets use the , typically -i for masculine (e.g., flexneri from Flexner) or -ae for feminine, with intentional latinizations preserved to honor the intent. Italicization of scientific names is mandatory under Rule 62 to distinguish them from common text, though it is a typographical convention rather than a nomenclatural requirement; author citations and authorities follow in (e.g., Escherichia coli (Migula 1895) Castellani and Chalmers 1919). Compound names, formed by joining stems with connecting vowels like -i- (Latin) or -o- (Greek), must adhere to without hyphens unless inherent to chemical terms (e.g., otitidiscaviarum), as detailed in Rule 58. Appendix 9 provides comprehensive guidance on these compounds, etymologies, and corrections, recommending avoidance of non-Latin/Greek words unless unavoidable and emphasizing that orthographic variants (e.g., Haemophilus vs. Hemophilus) do not alter priority if based on alone. Authors proposing new names are required to include etymologies to clarify derivations, facilitating verification and preventing errors under Rule 65. Only correctly formed names qualify for priority under the ICNP.

Special Cases and Provisions

Nomenclature for

, as prokaryotic organisms, have a unique nomenclatural status under the International Code of Nomenclature of Prokaryotes (ICNP), reflecting their historical classification within botanical traditions. Prior to 1999, were exclusively governed by the International Code of Nomenclature for algae, fungi, and plants (ICN). In 1999, the ICNP was amended through modification of General Consideration 5 to formally include within its scope, establishing dual coverage under both codes to address taxonomic overlaps and ensure nomenclatural stability. This shift aimed to resolve conflicts arising from their prokaryotic nature while preserving established botanical names. The dual-code arrangement persisted with asymmetries until recent revisions. In 2020, a proposal was made to emend the ICNP to reciprocate Article 45.1 of the ICN, allowing names of Cyanobacteria validly published under the ICN to be recognized as valid under the ICNP provided they meet minimal criteria, such as valid publication requirements. This proposal was approved by the International Committee on Systematics of Prokaryotes (ICSP) in a ballot conducted from April to May 2021, with 21 delegates voting in favor and the others rejected or not voting. The emendations, effective from the publication of the revised ICNP in 2022, updated General Consideration 5 to affirm that the ICNP applies to all prokaryotes including Cyanobacteria, and that ICN-valid names are valid under the ICNP if compliant. Central to these provisions is Rule 18a of the ICNP, which governs the valid publication of names. Under the emended Rule 18a, names published in accordance with the ICN are considered validly published under the ICNP from the date of the Code's 2022 revision, provided they satisfy core ICNP requirements like designation of a type. For types, strains are preferred where possible, but until December 31, 2000, descriptions, preserved specimens, or illustrations could serve as types if no strain was available; since , 2001, only strains are permitted. This rule aligns nomenclature with prokaryotic standards while accommodating botanical legacies. Priority for Cyanobacteria names is determined by the earliest valid publication date across both codes, with names validly published before January 1, 1980, treated as published on that date per the Approved Lists of Bacterial Names. Rule 24a specifies that priority for names valid under the ICN follows Article 13.1 of that code, ensuring the oldest legitimate name prevails. Rule 30 further clarifies that taxa names valid under the ICN are also valid under the ICNP, promoting harmonization without requiring dual publications. Appendix 3 of the ICNP lists authoritative sources for prokaryotic names, including those for from both codes, such as the List of Prokaryotic names with Standing in Nomenclature (LPSN), to facilitate verification and avoid homonymy. Illustrative examples highlight the practical application of these rules. The genus name Oscillatoria remains valid under both codes without needing separate validation, as its earliest publication predates the dual coverage. Similarly, Prochlorococcus Chisholm et al. 1992, originally described under , retains priority under the ICNP due to its valid publication status. These cases demonstrate that no redundant naming is required, allowing seamless integration across codes.

Candidatus Names for Uncultured Prokaryotes

The Candidatus designation provides a provisional naming system for prokaryotic taxa that cannot be cultivated in pure culture, enabling researchers to describe and name putative organisms based on molecular, genomic, and environmental data without meeting the full requirements for valid publication under the International Code of Nomenclature of Prokaryotes (ICNP). This approach was first proposed by Murray and Schleifer in to address the growing number of uncultured microbes identified through techniques like 16S rRNA sequencing, allowing for systematic recording of their properties while acknowledging their incomplete characterization. The prefix "Candidatus" (italicized) is added to the genus and species names, such as Candidatus Desulforudis audaxviator, a sulfate-reducing bacterium discovered in deep subsurface environments, where it forms monospecific biofilms supported by geochemical energy sources. Under Appendix 11 of the ICNP (as emended in the 2022 revision), Candidatus names lack formal nomenclatural standing and do not establish priority over validly published names, serving instead as placeholders tracked in lists maintained by the International Committee on Systematics of Prokaryotes (ICSP) Judicial Commission and the International Journal of Systematic and Evolutionary Microbiology (IJSEM) Editorial Board. Requirements for proposing a Candidatus name include a detailed description encompassing more than sequences alone, such as genomic information, morphological features (with illustrations), physiological traits, metabolic pathways, reproductive characteristics, habitat details, and evidence from in situ methods like hybridization. The nomenclatural type must be specified, typically a sequence deposited in public databases (e.g., INSDC) or a defined environmental sample, rather than a pure culture strain. Proposals must be effectively published, with registration in IJSEM required for inclusion in official Candidatus lists, which are periodically updated (e.g., List no. 1 in 2020, List no. 2 in 2021). Names must adhere to ICNP rules in Appendix 9, including etymological explanations. These lists continue to be updated, with List No. 7 published in 2025. In a significant 2025 update, effective from January 9, 2025, the ICNP added Section 10 (Rules 66–73) to further integrate Candidatus names, granting them "pro-validly published" and "pro-legitimate" status while maintaining their provisional nature. This revision, approved following and ICSP ballot, regulates Candidatus names analogously to validly published ones for , typification, and stability, but without conferring priority or allowing competition in formal . Key provisions include mandatory reuse of an existing Candidatus name (with "ex" citation of original authors) if a is later cultivated and validly published under the same name, and mechanisms for replacing nomenclatural types (e.g., with higher-quality genomes) or rejecting low-quality proposals via the Judicial Commission. Pro-valid now requires effective in IJSEM or inclusion in its lists, with types like sequences or non-pure cultures made publicly accessible. Despite these advancements, Candidatus names remain limited to provisional use and cannot be employed in constructing formal taxonomic hierarchies until a validly published name is established through cultivation and full description. They do not restrict taxonomic opinions or freedom in classification, emphasizing their role in bridging molecular discoveries with traditional . This system has facilitated the documentation of thousands of uncultured lineages, particularly in environmental , while preserving the ICNP's emphasis on type strains for valid .

Comparisons with Other Codes

Key Differences from the International Code of Nomenclature for Algae, Fungi, and Plants

Comparisons are based on the ICNP (2022 revision) and ICN (Madrid Code, 2025), unless otherwise noted. The International Code of Nomenclature of Prokaryotes (ICNP) and the International Code of Nomenclature for algae, fungi, and plants (ICN) diverge significantly in orthographic rules, reflecting adaptations to prokaryotic versus the botanical heritage of the ICN. Under the ICNP, hyphens are prohibited in scientific names, with previously hyphenated names or new compounds required to be joined without them, and diacritics are suppressed (e.g., "" becomes "ae"). In contrast, the ICN permits hyphens in generic names and specific epithets for compound words (Art. 20.3, 23.1, 60), and while it also suppresses diacritics in Latin names, it allows their retention in certain personal or vernacular derivations before suppression. Rules for italicization and author citations further highlight ICNP flexibility tailored to bacteriological literature. The ICNP mandates italics for names and binomial combinations but treats author citations as optional for validity, with abbreviations like "sp. nov." recommended but not required in descriptions, allowing contextual adaptation in publications. The ICN, however, enforces stricter conventions: scientific names at all ranks up to family must be italicized (Art. 60.1), and author citations are recommended but not required for valid publication and follow precise formats (e.g., "L." for Linnaeus); the ICN does not use optional qualifiers like "nov.". A core distinction lies in nomenclatural types, essential for name stability. The ICNP requires a living type strain—deposited in at least two international culture collections—for and , emphasizing viable cultures as the permanent (Rule 18a, 30). Conversely, the ICN mandates preserved specimens (e.g., sheets) as types, prohibiting living plants or cultures except for metabolically inactive fungal or algal cultures (Art. 8.4–8.5). This prokaryote-specific mandate in the ICNP ensures accessibility for physiological and genetic studies, unlike the ICN's focus on static morphological vouchers. Priority principles also differ markedly in temporal scope and application. In the ICNP, priority begins on January 1, 1980, tied to the Approved Lists of Bacterial Names; although priority is limited to post-1980 names (Rule 24a), the ICNP allows conservation of generic names against earlier synonyms through Judicial Commission-approved lists (Appendix 4), prioritizing bacteriological stability while permitting exceptions to historical precedence. The ICN establishes priority from May 1, 1753 (Linnaeus's ), extending to 1789 for some and fungi, and includes provisions for conserving generic names (Art. 14, 23), allowing botanical committees to override strict chronology for practical utility. For , an exception promotes harmonization between codes. Names validly published under the ICN are recognized by the ICNP, but priority for follows ICN dates (e.g., 1753 or later per group), with bacteriological descriptions prioritized for type strains when conflicts arise (Rule 24a, emended 2022). The 2025 Madrid Code further refines provisions for algal and fungal names, enhancing reciprocity with the ICNP for . This reciprocity, formalized in the ICNP's 2022 revision, contrasts with the ICN's unilateral recognition of ICNP names (Art. 45.1) but lacks full mutual typification alignment. Typification for higher ranks underscores ICNP's streamlined approach versus the ICN's elaboration. The ICNP limits detailed typification to ranks down to class, with higher taxa (e.g., ) typified solely by included lower-rank types without additional provisions (Rule 15). The ICN, however, provides explicit rules for typification above the rank, basing it on the type of the nominal or and allowing designations for superfamilies and above (Art. 10, 37). This reflects the ICN's botanical emphasis on hierarchical stability across extensive and morphological records.

Key Differences from the International Code of Zoological Nomenclature

The International Code of Nomenclature of Prokaryotes (ICNP) and the (ICZN) differ fundamentally in their approach to type material, reflecting the biological distinctions between prokaryotes and animals. Under the ICNP, the nomenclatural type for a or is a designated type strain, typically a living culture maintained in pure form that aligns with the original description and is deposited in at least two international culture collections in different countries to ensure accessibility and preservation. In contrast, the ICZN relies on fixed specimens, such as holotypes, syntypes, lectotypes, or neotypes, which serve as the name-bearing types for species-group taxa and are usually preserved physical specimens in museums or collections. Subspecies nomenclature also varies between the codes. The ICNP mandates a trinomial designation for all subspecies names, consisting of the genus name, specific epithet, "subsp.", and a subspecific epithet, without provision for a standalone binomial form at the subspecies level. The ICZN, however, employs a flexible trinomial (trinomen) for subspecies—combining the binomen of the species with a subspecific epithet—but allows contextual use of the binomial alone when the subspecific rank is implied or not disputed, accommodating varied taxonomic practices in zoology. The principle of priority operates on different temporal foundations in each code. In the ICNP, priority is strictly reckoned from January 1, 1980, the date of the Approved Lists of Bacterial Names, with names absent from these lists considered invalid unless subsequently validly ; this code lacks a principle of coordination, where higher-rank names automatically derive stability from species-group types. Conversely, the ICZN establishes priority from January 1, 1758, the publication date of the tenth edition of Linnaeus's , and incorporates the principle of coordination, ensuring that names at family-group, genus-group, and species-group ranks are interdependent for stability and validity. Mechanisms for maintaining nomenclatural stability diverge notably. The ICNP does not permit the rejection of names solely for causing confusion via broad plenary powers, as in the ICZN; instead, the ICNP promotes stability exclusively through Judicial Commission-approved lists of conserved (nomina conservanda) and rejected (nomina rejicienda) names. Publication requirements for validly establishing names highlight procedural contrasts tailored to their domains. Valid publication under the ICNP requires explicit inclusion in the International Journal of Systematic and Evolutionary Microbiology (IJSEM), either as a full description with type designation or via Notification/Validation Lists, or prior inclusion on the 1980 Approved Lists. The ICZN, by comparison, accepts publication in any serial work, book, or equivalent that meets criteria for availability, such as clear indication of new taxa, authorship, and date, without mandating a specific journal. Language conventions for forming names reflect differing emphases on classical roots versus practicality. The ICNP requires names to be Latin or latinized, preferably derived from Latin or Greek elements, but permits exceptions for vernacular terms, acronyms, or local names without strict enforcement of classical purity. In the ICZN, while Latin forms are preferred and names are treated grammatically as Latin regardless of origin, unmodified words are allowed if appropriately latinized, providing greater flexibility for incorporating non-classical elements while prioritizing euphonious and non-confusing results.

Current Version and Updates

Overview of Major Revisions

The 1990 revision of the International Code of Nomenclature of Bacteria updated rules for bacterial nomenclature, formally including archaeal genera such as Methanococcus and Methanosarcina in lists of conserved names to address the growing recognition of archaeal diversity following Woese's domain classification. This revision also included key appendices, such as Appendix 4, which lists conserved and rejected names like Enterobacteriaceae and Escherichia to promote nomenclatural stability. Although archaeal names had been validated under the code since the 1980 Approved Lists, the explicit renaming to the International Code of Nomenclature of Prokaryotes (ICNP) to reflect its scope over all prokaryotes occurred in the 2008 revision (published in 2019). The 2008 revision further refined the ICNP by updating orthography rules in Chapter 6 (Rules 57a–64), which cover spelling, latinization, and treatment of diacritic signs, alongside revisions to Appendix 9 for consistent name formation. It also clarified gender agreements for generic names under Rule 65, designating examples like Lactobacillus as masculine to standardize etymological practices. Additionally, Chapter 4 added advisory notes for authors and publishers on publication requirements, while Appendix 6 introduced minimal standards for taxonomic descriptions, such as those for aerobic endospore-forming bacteria and methanogenic Archaea, to ensure rigorous validation of new taxa. Preceding the 2022 update, changes from 2015 to 2020 focused on proposals to expand type material definitions, though efforts to include sequences as types were ultimately rejected to maintain traditional criteria for valid . In 2019, new statutes empowered the to handle emendations, streamlining updates to existing taxa without full plenary approval. These revisions enhanced the code's adaptability amid advances in and uncultured studies. Overall, these major revisions have significantly impacted prokaryotic , increasing the number of validly published names from approximately 5,000 in the 1980 Approved Lists to over 22,900 species by 2023, driven partly by provisions for Candidatus names. Stability was bolstered through Appendix 5's judicial opinions, such as Opinion 1 on Bacillus megaterium, which resolve disputes and conserve priority. The of appendices, particularly Appendix 6's addition of minimal standards for specific taxa like endospore-formers, has supported consistent and evidence-based . The 2022 revision culminated these developments.

Details of the 2022 Revision

The 2022 Revision of the International Code of Nomenclature of Prokaryotes (ICNP) was published in May 2023 as a special issue of the International Journal of Systematic and Evolutionary Microbiology (IJSEM), edited by Aharon Oren and colleagues. This edition supersedes the 1990 Bacteriological Code and the 2008 ICNP Revision, incorporating 45 approved proposals developed between 2008 and 2020 through a rigorous international process. The revision aims to modernize nomenclature practices in light of advances in prokaryotic , ensuring stability and universality in naming while addressing contemporary challenges in microbial . The document's structure is organized into four main chapters covering general considerations, principles, rules with recommendations, and advisory notes, followed by Section 9 dedicated to and name formation guidelines. It includes 13 appendices that provide practical tools, such as lists of approved names (Appendix 2), conserved and rejected names (Appendix 4), judicial opinions (Appendix 5), orthographic recommendations (Appendix 9), and provisions for Candidatus names (Appendix 11). This framework maintains the ICNP's foundational approach while enhancing accessibility for researchers dealing with diverse prokaryotic taxa. Key changes introduced in the 2022 Revision include the formal recognition of the phylum rank under Rule 5b, which mandates the use of conserved names over earlier synonyms or homonyms unless taxa are united, thereby standardizing higher-level classifications. Rule 18a was amended to restrict type designations to physical strains deposited after 2001, explicitly rejecting gene sequences or digital data as valid types and prohibiting reliance on descriptions or illustrations alone for post-2000 taxa. Gender agreement rules were updated to classify names ending in -oides as neuter and -opsis as feminine, resolving longstanding ambiguities in generic nomenclature. Additionally, Appendices 4 and 5 were revised to incorporate new conserved names (e.g., for Enterobacteriaceae) and recent Judicial Commission opinions, while Appendix 9 expanded orthographic guidance, including latinization of personal names used in etymology. Rule 18a also harmonizes nomenclature for Cyanobacteria by aligning with botanical codes for type requirements. The revision process began with a period from July to December 2021, hosted on the International Committee on of Prokaryotes (ICSP) website and a dedicated Slack platform, inviting global input on proposed emendations. Authors responded to feedback between January and February 2022, after which the ICSP conducted a among its full and co-opted members from to 2022, resulting in the approval of the 45 proposals. This democratic approach, overseen by the Judicial Commission, ensured broad consensus while rejecting contentious ideas like gene sequences as types to preserve the Code's emphasis on verifiable physical specimens. The 2022 Revision addresses gaps from pre-2008 nomenclature by updating Approved Lists and minimal description standards, reducing inconsistencies in legacy taxa. It enhances guidance for Candidatus names in Appendix 11, providing clearer protocols for uncultured prokaryotes without subjecting them to full regulatory rules. Implications extend to the era of big data, facilitating the integration of genomic and metagenomic evidence into taxonomic descriptions while maintaining nomenclatural stability; post-2022 discussions have proposed further inclusions for kingdom and domain ranks to accommodate evolving phylogenetic frameworks. As of November 2025, a 2025 revision of the ICNP is in preparation. The published proposed emendations on 29 2025, incorporating approved proposals from December 2022 to November 2024, with public discussion ongoing to address refinements in response to advances like genomic .

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