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Passerea
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| Passerea | |
|---|---|
| Beautiful firetail (Stagonopleura bella) | |
| Scientific classification | |
| Kingdom: | Animalia |
| Phylum: | Chordata |
| Class: | Aves |
| Infraclass: | Neognathae |
| Clade: | Neoaves |
| Clade: | Passerea Jarvis et al., 2014 |
| Clades | |
| |
Passerea is a taxon of neoavian birds that was proposed by Jarvis et al. (2014).[3] Their genomic analysis recovered two major clades within Neoaves, Passerea and Columbea, and concluded that both clades appear to have many ecologically driven convergent traits.
According to Jarvis (2014), these convergences include the foot-propelled diving trait of grebes in Columbea with loons and cormorants in Passerea; the wading-feeding trait of flamingos in Columbea with ibises and egrets in Passerea; and pigeons and sandgrouse in Columbea with shorebirds (killdeer) in Passerea. For Jarvis (2014), these long-known trait and morphological alliances suggest that some of the traditional nongenomic trait classifications are based on polyphyletic assemblages.
Passerea was not recovered in other studies.[4][1]
Phylogeny
[edit]Cladogram of Passerea relationships based on Jarvis et al. (2014)[3] with some clade names after Yuri et al. (2013)[5] and Kimball et al. 2013.[6]
| Passerea | |
The following cladogram illustrates the proposed relationships between bird clades of Passerea. This consensus phylogeny of birds is based on phylogenomic data, reflecting a recent phylogenomic supertree analysis per Stiller et al. (2024).[2]
| Passerea |
Failed to capture subclade with label Passerea |
References
[edit]- ^ a b Kuhl, H.; Frankl-Vilches, C.; Bakker, A.; Mayr, G.; Nikolaus, G.; Boerno, S. T.; Klages, S.; Timmermann, B.; Gahr, M. (2020). "An unbiased molecular approach using 3'UTRs resolves the avian family-level tree of life". Molecular Biology and Evolution. 38: 108–127. doi:10.1093/molbev/msaa191. PMC 7783168. PMID 32781465.
- ^ a b Stiller, J., Feng, S., Chowdhury, AA. et al. Complexity of avian evolution revealed by family-level genomes. Nature (2024). https://doi.org/10.1038/s41586-024-07323-1
- ^ a b Jarvis, E. D.; Mirarab, S.; Aberer, A. J.; et al. (2014). "Whole-genome analyses resolve early branches in the tree of life of modern birds". Science. 346 (6215): 1320–1331. Bibcode:2014Sci...346.1320J. doi:10.1126/science.1253451. PMC 4405904. PMID 25504713.
- ^ Prum, Richard O.; Berv, Jacob S.; Dornburg, Alex; Field, Daniel J.; Townsend, Jeffrey P.; Lemmon, Emily Moriarty; Lemmon, Alan R. (2015). "A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing". Nature. 526 (7574): 569–573. Bibcode:2015Natur.526..569P. doi:10.1038/nature15697. ISSN 1476-4687. PMID 26444237.
- ^ Yuri, T.; Kimball, R.T.; Harshman, J.; Bowie, R.C.K.; Braun, M.J.; Chojnowski, J.L.; et al. (13 March 2013). "Parsimony and model-based analyses of indels in avian nuclear genes reveal congruent and incongruent phylogenetic signals". Biology. 2 (1): 419–444. doi:10.3390/biology2010419. PMC 4009869. PMID 24832669.
- ^ Kimball, R.T.; Wang, N.; Heimer-McGinn, V.; Ferguson, C.; Braun, E.L. (December 2013) [20 June 2013]. "Identifying localized biases in large datasets: A case study using the Avian tree of life". Molecular Phylogenetics and Evolution. 69 (3): 1021–1032. Bibcode:2013MolPE..69.1021K. doi:10.1016/j.ympev.2013.05.029. PMID 23791948.
Passerea
View on GrokipediaTaxonomy
Etymology
The name Passerea derives from the Latin word passer, meaning "sparrow," which forms the root of Passeriformes, the order of perching birds (passerines) that constitutes the clade's most speciose group and exemplifies its dominant terrestrial lineages.[1] This taxonomic term was formally proposed by Jarvis et al. in 2014 as part of their genome-scale phylogenetic analysis of modern birds, designating Passerea as one of two reciprocally monophyletic sister clades diverging early within Neoaves, the other being Columbea.[1] The authors explicitly named it after Passeriformes to underscore the clade's inclusion of diverse landbirds allied with songbirds and vocal-learning taxa.[1] By evoking the sparrow-like perching adaptations central to Passeriformes, the name emphasizes Passerea's focus on primarily terrestrial and arboreal birds, distinguishing it from Columbea, whose nomenclature highlights more aquatic and ground-dwelling forms like columbiforms.[1]Classification history
Prior to 2014, classifications of Neoaves often informally grouped birds into landbirds and waterbirds based on ecological and morphological similarities, but these assemblages were frequently polyphyletic and lacked formal cladistic definitions. For instance, DNA-DNA hybridization studies proposed a landbird clade encompassing diverse orders like raptors, woodpeckers, and passerines, while morphological analyses reinforced similar divisions without resolving deeper relationships.[4] Mitochondrial genome data sometimes failed to support landbird monophyly, highlighting inconsistencies in pre-genomic era taxonomies.[4] The clade Passerea was first formally proposed in 2014 through a genome-scale phylogenetic analysis of 48 bird species representing all Neoaves orders, marking the initial recognition of a monophyletic group uniting core landbirds (Telluraves) with elements of waterbirds (Aequornithia). This study, utilizing coalescent-based methods on thousands of genes, identified Passerea as one of two primary Neoaves lineages alongside Columbea, with strong bootstrap support for its monophyly. The name Passerea reflects the dominance of Passeriformes, the largest avian order, within the clade.[5] Following the 2014 proposal, refinements and debates emerged regarding Passerea's exact boundaries and monophyly, particularly from a 2015 study analyzing targeted next-generation sequencing data from 198 bird species. This work challenged Passerea's monophyly, instead supporting a broad landbird assemblage termed Inopinaves that excluded certain waterbird elements included in the original definition, while affirming similar core groupings of raptors, parrots, and songbirds. Subsequent genomic analyses have shown mixed results, with some reinforcing Passerea-like structures in Neoaves divergences—such as a 2024 study attributing support to a region of suppressed recombination—though more comprehensive genome-wide analyses, including Stiller et al. (2024) resolving Neoaves into four major clades (Mirandornithes, Columbaves, Telluraves, and Elementaves) without Passerea, and a 2025 morphological study of the quadrate explicitly rejecting its monophyly, indicate ongoing challenges. It has not been universally integrated into major taxonomic lists like those of the IOC World Bird List, which favor alternative higher-level arrangements based on Prum et al. (2015). These debates underscore ongoing efforts to reconcile genome-scale data with denser taxon sampling for stable avian classification.[6][7][3][8]Phylogeny
Proposal and molecular evidence
The classification of Neoaves, the largest clade of modern birds, had long been hampered by unresolved deep phylogenetic branches, often attributed to incomplete lineage sorting and convergent evolution.[1] In 2014, a landmark study by Jarvis et al. analyzed whole-genome sequences from 48 bird species, representing all orders of Neoaves, to resolve these early divergences. The researchers compiled a dataset comprising 8,251 protein-coding genes (approximately 41.8 million base pairs), including exons, introns, and 3,769 ultraconserved elements, drawn from nuclear genomes. To address challenges such as low phylogenetic signal in individual loci, they employed genome-scale phylogenomic methods, including maximum likelihood concatenation via ExaML and multispecies coalescent modeling with MP-EST*, supplemented by a statistical binning technique to group loci with similar phylogenetic signals and mitigate noise from incomplete lineage sorting.[1] The analysis recovered a highly supported topology revealing the first major divergence within extant Neoaves into two reciprocally monophyletic sister clades: Passerea and Columbea. Passerea emerged as the larger basal Neoavian clade, positioned sister to Columbea, with 100% bootstrap support for this bipartition. According to the study, Passerea initially encompassed approximately 5,000 species, predominantly terrestrial neoavians such as core landbirds including passerines.[1]Support from subsequent studies
Subsequent phylogenomic studies have provided varying degrees of support for the Passerea clade proposed by Jarvis et al. in 2014, often refining its internal structure while addressing early uncertainties in neoavian relationships, though methodological differences continue to influence outcomes. Prum et al. analyzed over 390 nuclear loci from 198 bird species using targeted next-generation sequencing, yielding partial support for a Passerea-like grouping of perching birds, parrots, and related lineages, although the clade was not recovered as strictly monophyletic due to alternative arrangements among core landbirds and waterbirds.[6] Subsequent reanalyses of non-coding portions from this dataset have strengthened evidence for Passerea's monophyly by mitigating biases in coding regions.[9] Kuhl et al. analyzed 3'-untranslated region (3'-UTR) sequences from 233 bird species representing nearly 90% of avian families, resolving 91% of interfamily relationships with high bootstrap support; however, this study did not recover Passerea as monophyletic, instead supporting alternative neoavian groupings.[10] Phylogenomic investigations from 2021 to 2024 have shown mixed results for Passerea, with support in some datasets emphasizing non-coding sequences or coalescent models but challenges in others due to incomplete lineage sorting during the Cretaceous-Paleogene radiation. For instance, combined analyses incorporating retroelement insertions have identified diagnostic synapomorphies supporting Passerea's monophyly, with emergent congruence to the Jarvis arrangement in total-evidence frameworks that integrate thousands of gene trees and over 2,000 insertions.[11] A 2024 family-level genomic analysis of 363 species by Stiller et al., using coalescent-based methods, did not recover Passerea or Columbea as monophyletic; instead, it resolved Neoaves into four major clades—Mirandornithes (flamingos and grebes), Columbaves (pigeons and relatives), Telluraves (core landbirds), and Elementaves (aequornithians with nightjars, hoatzin, and shorebirds)—attributing discrepancies to a recombination-suppressed region on chromosome 4 that misleadingly supports the Jarvis topology.[3] These findings highlight ongoing debates in avian systematics, where data types (e.g., coding vs. non-coding regions) and genomic regions influence deep-level relationships.[7] Areas of debate persist regarding minor boundary adjustments within Passerea-like groupings, such as the precise placement of Strisores (encompassing nightjars and swifts), which some whole-genome studies position near the base of the clade while others suggest closer affinity to core landbirds based on specific recombination-suppressed regions.[7]Cladogram and relationships
Passerea forms one of the two primary clades within Neoaves as proposed in 2014, positioned as the sister group to Columbea, with this basal split supported at 100% bootstrap in the original genomic analyses. The clade is monophyletic in that topology, encompassing the majority of landbird lineages, and originated through a divergence approximately 66 million years ago, shortly after the Cretaceous-Paleogene (K-Pg) extinction event. A cladogram based on the Jarvis et al. (2014) whole-genome phylogenomics places Passerea as follows within Neoaves:- Neoaves
- Columbea
- Passerea
- Strisores (nightjars, potoos, oilbirds, swifts, hummingbirds)
- Telluraves (core landbirds)
- Afroaves
- Strigiformes (owls)
- Accipitrimorphae (Accipitriformes, Cathartiformes)
- Piciformes (woodpeckers)
- Coraciiformes (kingfishers, etc.)
- Bucerotiformes (hornbills)
- Australaves
- Cariamiformes (seriemas)
- Falconiformes (falcons)
- Psittacopasserae
- Psittaciformes (parrots)
- Passeriformes (passerines)
- Afroaves
Composition
Major subclades
Passerea was proposed to comprise three primary subclades reflecting its early diversification following the Cretaceous–Paleogene extinction event: core landbirds (Telluraves), core waterbirds (Aequornithia), and Phaethontimorphae.[1] These divisions were supported by the original genome-scale phylogenetic analyses of Jarvis et al. (2015), which resolved Passerea as a monophyletic group within Neoaves, though subsequent studies have challenged this monophyly.[1] Telluraves forms the core landbird assemblage within the proposed Passerea, comprising predominantly diurnal, perching species adapted to terrestrial and arboreal habitats.[1] It is subdivided into two main branches: Australaves, which includes raptorial and perching forms like seriemas (Cariamiformes), falcons (Falconiformes), parrots (Psittaciformes), and passerines (Passeriformes); and Afroaves, encompassing diverse lineages such as owls (Strigiformes), woodpeckers (Piciformes), and mousebirds (Coliiformes).[1] The divergence of Telluraves from the other Passerea lineages was estimated at approximately 55 Ma in the 2015 analysis.[1] Aequornithia represents the core waterbird subclade, encompassing diving and wading species such as penguins (Sphenisciformes), loons (Gaviiformes), petrels and albatrosses (Procellariiformes), herons and egrets (Ardeidae within Pelecaniformes), pelicans (Pelecanidae), and cormorants (Phalacrocoracidae within Suliformes).[1] This group is characterized by adaptations for aquatic lifestyles, with its separation from landbirds highlighting parallel radiations in marine and freshwater environments post-extinction. Phaethontimorphae is the smallest subclade, featuring tropicbirds (Phaethontiformes) as sister to the sunbittern (Eurypygiformes).[1] These aerial and coastal specialists diverged early within Passerea, with molecular evidence placing their split around 60-70 Ma.[1]Included orders and families
The proposed Passerea encompasses approximately 5,000–6,000 species across more than 20 orders, accounting for roughly half of all extant bird species (as of 2023 estimates).[1] This diversity is dominated by the order Passeriformes, which includes over 6,000 species in about 140 families. The clade focuses on landbird and waterbird lineages, excluding those in the sister clade Columbea such as Columbiformes (pigeons) and Cuculiformes (cuckoos). The major orders and selected key families are outlined below, organized by representative subclades. These groupings reflect the molecular phylogenetic evidence from the 2015 proposal supporting Passerea's composition.[1]| Order | Approximate Species Count | Key Families (Examples) | Subclade |
|---|---|---|---|
| Passeriformes | 6,000+ | Tyrannidae (tyrant flycatchers), Fringillidae (finches), Corvidae (crows and jays) | Telluraves |
| Psittaciformes | 400 | Psittacidae (true parrots), Cacatuidae (cockatoos) | Telluraves |
| Piciformes | 450 | Picidae (woodpeckers), Ramphastidae (toucans) | Telluraves |
| Strigiformes | 250 | Strigidae (true owls), Tytonidae (barn owls) | Telluraves |
| Accipitriformes | 260 | Accipitridae (hawks, eagles, Old World vultures) | Telluraves |
| Falconiformes | 70 | Falconidae (falcons and caracaras) | Telluraves |
| Coraciiformes | 120 | Coraciidae (rollers), Alcedinidae (kingfishers) | Telluraves |
| Bucerotiformes | 70 | Bucerotidae (hornbills) | Telluraves |
| Trogoniformes | 45 | Trogonidae (trogons and quetzals) | Telluraves |
| Coliiformes | 6 | Coliidae (mousebirds) | Telluraves |
| Cariamiformes | 7 | Cariamidae (seriemas) | Telluraves |
| Procellariiformes | 130 | Procellariidae (petrels), Diomedeidae (albatrosses) | Aequornithia |
| Pelecaniformes | 75 | Ardeidae (herons, egrets), Pelecanidae (pelicans) | Aequornithia |
| Suliformes | 200 | Phalacrocoracidae (cormorants), Sulidae (gannets, boobies) | Aequornithia |
| Sphenisciformes | 20 | Spheniscidae (penguins) | Aequornithia |
| Gaviiformes | 5 | Gaviidae (loons) | Aequornithia |
| Phaethontiformes | 3 | Phaethontidae (tropicbirds) | Phaethontimorphae |
| Eurypygiformes | 1 | Eurypygidae (sunbittern) | Phaethontimorphae |