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Violin plot
Violin plot
from Wikipedia
Example of a violin plot
Example of a violin plot in a scientific publication in PLOS Pathogens.

A violin plot (also known as a bean plot) is a statistical graphic for comparing probability distributions. It is similar to a box plot, but has enhanced information with the addition of a rotated kernel density plot on each side.[1]

History

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The violin plot was proposed in 1997 by Jerry L. Hintze and Ray D. Nelson as a way to display even more information than box plots, which were created by John Tukey in 1977.[2] The name comes from the plot's alleged resemblance to a violin.[2]

Description

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Violin plots are similar to box plots, except that they also show the probability density of the data at different values, usually smoothed by a kernel density estimator. A violin plot will include all the data that is in a box plot: a marker for the median of the data; a box or marker indicating the interquartile range; and possibly all sample points, if the number of samples is not too high.

While a box plot shows a summary statistics such as mean/median and interquartile ranges, the violin plot shows the full distribution of the data. The violin plot can be used in multimodal data (more than one peak). In this case a violin plot shows the presence of different peaks, their position and relative amplitude.

Like box plots, violin plots are used to represent comparison of a variable distribution (or sample distribution) across different "categories" (for example, temperature distribution compared between day and night, or distribution of car prices compared across different car makers).

A violin plot can have multiple layers. For instance, the outer shape represents all possible results. The next layer inside might represent the values that occur 95% of the time. The next layer (if it exists) inside might represent the values that occur 50% of the time.

Violin plots are less popular than box plots. Violin plots may be harder to understand for readers not familiar with them. In this case, a more accessible alternative is to plot a series of stacked histograms or kernel density plots.

The original meaning of "violin plot" was a combination of a box plot and a two-sided kernel density plot.[1] However, currently "violin plots" are sometimes understood just as two-sided kernel density plots, without a box plot or any other elements.[3][4]

See also

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References

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Revisions and contributorsEdit on WikipediaRead on Wikipedia
from Grokipedia
A violin plot is a statistical graphic used to compare probability distributions across multiple groups or categories, combining the of a traditional with the of a kernel density plot (also known as a density trace or smoothed histogram) to reveal both central tendencies and the overall shape of the data distribution. Introduced by Jerry L. Hintze and Ray D. Nelson in 1998, it builds on the box-and-whisker plot developed by John W. Tukey in 1977, which summarizes key data features like the , quartiles, , and outliers, while adding symmetric traces on either side to visualize peaks, valleys, , and asymmetry in the data. The core components of a violin plot include an embedded —typically with a solid line or point for the , a box spanning the first and third quartiles, and whiskers extending to the data extremes or 1.5 times the —overlaid with mirrored kernel density estimates that widen or narrow to reflect the concentration of data points, creating a shape reminiscent of a or . This design enhances by pooling the strengths of both visualizations: the 's robust summary of location, scale, and potential outliers, and the density trace's ability to highlight distributional structure, such as clusters or gaps, that might be obscured in histograms or simple alone. Violin plots are particularly valuable in fields like , bioinformatics, and for comparing distributions without assuming normality, as they avoid the binning artifacts of histograms and provide a more intuitive view of data density than box plots. They can be customized, such as by adjusting kernel bandwidth for smoother densities or incorporating logarithmic scales for skewed data, and are implemented in software like (via ), Python (via seaborn or ), and statistical packages like NCSS, where they originated as an enhancement for batch . Despite their advantages, violin plots may obscure exact data counts in dense regions and require sufficient sample sizes for reliable density estimates, making them complementary to other plots like ridgeline or beeswarm visualizations in comprehensive data exploration.

Overview

Definition

A violin plot is a statistical graphic that combines the summary statistics inherent in a —such as the , quartiles, and indicators of spread and —with the distributional provided by a density trace, enabling the visualization and comparison of probability distributions across categorical groups. This hybrid approach pools features from alternative data representations to offer a more comprehensive view of batch data characteristics in a single display. The plot earns its name from the visual resemblance to a , created by the symmetric, bulbous forms of the mirrored traces extending outward from a central axis, which evoke the instrument's outline. Structurally, a violin plot features a primary axis (vertical or horizontal) for the numeric variable of interest, where each data group is represented by a pair of opposing curves that enclose an embedded , thereby integrating local information with robust summary measures.

Purpose

Violin plots serve as a visualization tool to display and compare the probability of distributions across multiple groups or categories, enabling analysts to examine the full shape of the rather than relying solely on like means or medians. By combining with summary measures, they reveal critical distributional features such as , , , and the presence of outliers, which provide deeper insights into the underlying . This approach is particularly useful for identifying subtle patterns that aggregate statistics might obscure, including multiple peaks suggestive of bimodality or elongated tails indicating heavy-tailed distributions, thereby facilitating more informed data interpretation in exploratory analysis. For instance, violin plots can highlight clusters within groups, such as distinct modes in environmental measurements like snowfall amounts or geyser eruption durations. In practice, violin plots are commonly employed to compare distributions in categorical datasets, such as variations across academic ranks or performance metrics between experimental treatment groups, as well as for initial univariate data exploration to subsequent modeling decisions. Their ability to convey both and summary makes them valuable in fields requiring robust distributional comparisons without assuming normality.

History

Invention

The violin plot was proposed in 1998 by statisticians Jerry L. Hintze and Ray D. Nelson as a novel graphical method for data visualization. Their seminal paper, titled "Violin Plots: A Box Plot-Density Trace Synergism," was published in The American Statistician, where they described the plot as a synergistic combination of summary statistics and density traces to provide a more comprehensive representation of data distributions. Hintze, affiliated with the statistical software company NCSS, and Nelson, from Brigham Young University's Marriott School of Management, first implemented the violin plot in the NCSS software package in 1997, prior to the formal publication. The primary motivation for inventing the violin plot was to overcome the limitations of traditional box plots, which effectively summarize , spread, , and outliers but fail to convey the underlying or of the data distribution. By integrating traces symmetrically around the box plot elements, the violin plot adds visual information about local data density, enabling users to identify clusters, gaps, and overall distributional form in a single, compact display. This approach was intended to enhance by pooling the strengths of both methods without sacrificing interpretability. The violin plot was explicitly developed as an enhancement to the introduced by John W. Tukey in 1977, building on its foundational role in while addressing gaps in density representation. Tukey's , detailed in his book Exploratory Data Analysis, had become a standard tool for summarizing univariate distributions, but Hintze and Nelson sought to extend it for statistical software applications where fuller distributional insights were needed.

Adoption and Evolution

Following the initial proposal by Hintze and Nelson in 1998, violin plots experienced early adoption in commercial statistical software, including an implementation in NCSS prior to the paper's publication. The technique gained broader accessibility in the open-source R programming language during the late 1990s and early 2000s, with integrations in environments like S-PLUS and its port to R via the lattice package, which introduced the panel.violin function around 2001. This period marked the beginning of violin plots' integration into routine statistical analysis workflows. Subsequent refinements enhanced the plot's utility, including options for layered densities that delineate inner contours (e.g., representing the central 50% of the distribution) and outer (e.g., the full 95% range) to better highlight probability densities and variability. Horizontal orientations were also developed to improve readability, particularly for comparisons involving multiple categories or when vertical space is limited, as facilitated by functions like coord_flip() in ggplot2. These evolutions addressed limitations in the original design, making violin plots more versatile for . The ggplot2 package, released in 2007 and featuring geom_violin by version 1.0.0 in 2015, significantly accelerated adoption by providing intuitive, customizable implementations that aligned with the grammar of graphics paradigm. As of 2025, violin plots are a standard tool in leading data visualization libraries, including R's and lattice, Python's seaborn (introduced around 2012), and MATLAB's Statistics and Toolbox, driven by the proliferation of open-source ecosystems. The foundational has garnered over 1,600 citations, with violin plots appearing in more than 1,000 academic publications since 2010, underscoring their enduring impact in fields like bioinformatics, , and .

Components

Box Plot Elements

The box plot elements in a violin plot provide a summary of the , spread, and potential outliers in the distribution, overlaid within the density shape for enhanced visualization. The central box spans the (IQR), which captures the middle 50% of the from the 25th percentile (Q1) to the 75th percentile (Q3), offering a robust measure of variability less sensitive to extreme values than the full range. A horizontal line within this box marks the , or 50th percentile, indicating the data's central value. Whiskers extend vertically from the box ends to the smallest and largest data points that fall within 1.5 times the IQR below Q1 or above Q3, respectively, encompassing the bulk of the non-outlying observations and illustrating the data's overall extent without undue influence from anomalies. This convention, rooted in John Tukey's framework, helps identify the typical range while flagging deviations. Data points lying beyond the whisker tips—specifically, those more than 1.5 times the IQR from Q1 or Q3—are plotted as individual markers, such as dots or circles, to highlight potential outliers that may warrant further investigation for errors or interesting patterns in the distribution. These elements are symmetrically integrated into the violin plot's kernel density contours, allowing simultaneous assessment of and distributional form.

Kernel Density Elements

The kernel density elements in violin plots provide a continuous visualization of the distribution's through a symmetric trace. This trace is formed by computing a kernel estimate () of the and mirroring it on both sides of the central axis, creating the characteristic "" outline that extends equally left and right for balanced perceptual comparison. The width of the density trace varies proportionally to the estimated probability density, with broader sections denoting higher concentrations of data points and narrower sections indicating lower densities. This design reveals multimodal structures, , and overall form without the jagged edges or arbitrary binning associated with histograms, offering a smoother and more intuitive depiction of the underlying . Optionally, the region enclosed by the density trace can be shaded to fill the violin area, enhancing visibility of the density profile, while inner shaded regions may highlight targeted portions of the distribution to differentiate core densities from peripheral tails.

Construction

Kernel Density Estimation

(KDE) forms the core of the density component in violin plots, providing a smoothed representation of the underlying of a . This non-parametric technique estimates the from a of observations without assuming a specific parametric form, allowing violin plots to visualize multimodal distributions and density variations effectively. The KDE is mathematically defined as f^(x)=1nhi=1nK(xxih),\hat{f}(x) = \frac{1}{nh} \sum_{i=1}^n K\left(\frac{x - x_i}{h}\right), where nn is the number of data points xix_i, h>0h > 0 is the bandwidth parameter controlling the smoothness, and KK is a kernel function—a symmetric, non-negative function integrating to 1 that weights contributions from each data point based on its distance from xx. This formula aggregates local contributions from all observations, scaled by the bandwidth, to produce a continuous density estimate suitable for rendering the curved sides of a violin plot. A common choice for the kernel KK is the Gaussian kernel, K(u)=12πeu2/2,K(u) = \frac{1}{\sqrt{2\pi}} e^{-u^2/2},
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